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GABA/all

From SNPedia

Synthesis[edit]

 On chromosomeChromosome positionIn geneSummary
rs121856922170,814,316GAD1
rs37918782170,815,681GAD1
rs37625552170,815,885GAD1
rs37490342170,816,965GAD1
Rs121918345(C;C)2170,818,626GAD1common in clinvar
rs1219183452170,818,626GAD1
rs22411652170,821,869GAD1
rs7694042170,822,115GAD1
rs115423132170,822,115GAD1
rs38282752170,826,230GAD1
rs20587252170,833,611GAD1
rs7693902170,836,945GAD1
rs7694072170,837,198GAD1
rs37918512170,842,162GAD1
rs37918502170,851,590GAD1
rs7693912170,852,920GAD1
 On chromosomeChromosome positionIn geneSummary
rs22364181026,216,567GAD2
rs1856493171026,216,756GAD2
rs81905901026,216,765GAD2
rs18053981026,245,880GAD2
rs9929901026,278,252GAD2
rs81907481026,280,826GAD2

Degradation[edit]

 On chromosomeChromosome positionIn geneSummary
rs1731017168,746,097ABAT
rs724159992168,750,498ABAT
rs724159990168,768,220ABAT
rs121434578168,768,248ABAT
Rs121434578(G;G)168,768,248ABATcommon in clinvar
rs786205496168,768,866ABAT
rs1299926168,777,224ABAT
rs724159991168,781,360ABAT
 On chromosomeChromosome positionIn geneSummary
rs2760118624,503,362ALDH5A1
Rs2760118(G;G)624,503,362ALDH5A1common in clinvar
rs3765310624,503,369ALDH5A1
Rs3765310(C;T)624,503,369ALDH5A1Excess GHB in blood
Rs3765310(C;C)624,503,369ALDH5A1common in complete genomics
rs118203982624,504,871ALDH5A1
Rs118203982(G;G)624,504,871ALDH5A1common in clinvar
Rs118203984(G;G)624,528,049ALDH5A1common in clinvar
rs118203984624,528,049ALDH5A1
Rs118203983(C;C)624,528,057ALDH5A1common in clinvar
rs118203983624,528,057ALDH5A1
rs4352670624,603,840KIAA0319
Rs4352670(A;A)624,603,840KIAA0319
rs4236032624,606,499KIAA0319
Rs4236032(A;A)624,606,499KIAA0319
rs761100624,632,414KIAA0319
Rs761100(G;T)624,632,414KIAA0319normal risk
Rs761100(G;G)624,632,414KIAA0319higher risk for dyslexia
Rs761100(T;T)624,632,414KIAA0319normal risk
rs6935076624,644,094KIAA0319
rs2038137624,645,715KIAA0319
rs3756821624,646,593KIAA0319
Rs3212236(C;T)624,648,227TDP2
rs3212236624,648,227TDP2
Rs3212236(G;G)624,648,227TDP2normal risk
Rs3212236(A;A)624,648,227TDP2higher risk for dyslexia
Rs3212236(A;G)624,648,227TDP2normal risk

Transporters[edit]

  • SLC6A1 (GABA transporter type 1, GAT1)
 On chromosomeChromosome positionIn geneSummary
rs9990174310,998,753SLC6A1
rs794726859311,017,342SLC6A1-AS1
SLC6A1
rs794726860311,025,786SLC6A1
rs749240316311,026,281SLC6A1
rs2675163311,033,328SLC6A1
Rs2675163(T;T)311,033,328SLC6A1common in complete genomics
  • SLC6A13 (GABA transporter type 2, GAT2)
 On chromosomeChromosome positionIn geneSummary
rs55788112209,959SLC6A12
rs49936812211,754SLC6A12
rs201173812219,988IQSEC3
rs55504412226,756SLC6A13
rs1077402112240,132SLC6A13
rs1161333112242,301SLC6A13
rs796976112246,676SLC6A13
  • SLC6A11 (GABA transporter type 3, GAT3)
 On chromosomeChromosome positionIn geneSummary
rs1809529310,835,926SLC6A11
  • SLC6A12 (Betaine/GABA transporter, BGT1)
 On chromosomeChromosome positionIn geneSummary
rs55788112209,959SLC6A12
rs49936812211,754SLC6A12
  • SLC32A1 (Vesicular inhibitory amino acid transporter, VIAAT)
 On chromosomeChromosome positionIn geneSummary
rs11287452036,778,627SOGA1

Receptors[edit]

GABAA[edit]

alpha[edit]

 On chromosomeChromosome positionIn geneSummary
rs68838775161,851,332GABRA1
rs7960524885161,873,129GABRA1
rs5877773085161,873,196GABRA1
Rs587777308(G;G)5161,873,196GABRA1common in clinvar
rs7275039405161,882,638GABRA1
rs7960524905161,882,641GABRA1
rs5877773075161,890,945GABRA1
Rs587777307(G;G)5161,890,945GABRA1common in clinvar
rs7960524915161,890,982GABRA1
rs7960524925161,890,993GABRA1
rs7960524935161,895,668GABRA1
rs7960524955161,895,690GABRA1
rs7960524965161,895,693GABRA1
rs7960524975161,895,700GABRA1
rs8632252925161,895,711GABRA1
Rs587777309(A;A)5161,895,726GABRA1common in clinvar
rs5877773095161,895,726GABRA1
rs1214345795161,895,774GABRA1
Rs121434579(C;C)5161,895,774GABRA1common in complete genomics
rs22790205161,895,883GABRA1
Rs2279020(G;G)5161,895,883GABRA1common in clinvar
rs22907325161,897,892GABRA1
 On chromosomeChromosome positionIn geneSummary
rs6447493446,040,928GABRG1
rs1497571446,057,233GABRG1
rs17536211446,085,716GABRG1
rs497068446,248,660GABRA2
rs279871446,303,716GABRA2
Rs279858(A;G)446,312,576GABRA2None
rs279858446,312,576GABRA2
Rs279858(G;G)446,312,576GABRA2apparently more prone to alcoholism
Rs279858(A;A)446,312,576GABRA2None
rs279844446,327,638GABRA2
rs279845446,327,706GABRA2
rs279826446,332,192GABRA2
rs279827446,332,685GABRA2
rs279828446,332,793GABRA2
rs279836446,337,053GABRA2
rs9291283446,369,816GABRA2
rs11503014446,388,848GABRA2
 On chromosomeChromosome positionIn geneSummary
rs2072621X151,177,387GPR50
rs1202874X151,179,756GPR50
rs561077X151,181,177GPR50
rs13440581X151,181,399GPR50
rs1149374X151,221,459
rs2131190X152,245,827GABRA3
rs750841X152,297,246GABRA3
rs4828696X152,413,524GABRA3
rs3902802X152,428,729GABRA3
 On chromosomeChromosome positionIn geneSummary
rs9291296446,920,933GABRA4
rs7660336446,927,651GABRA4
Rs17599165(T;T)446,938,198GABRA4
rs17599165446,938,198GABRA4
rs1912960446,951,864GABRA4
Rs1912960(G;G)446,951,864GABRA4
rs2280073446,965,556GABRA4
rs2055942446,966,033GABRA4
Rs16859788(A;A)446,969,992GABRA4common in complete genomics
rs16859788446,969,992GABRA4
rs17599416446,971,421GABRA4
rs16859834446,993,349GABRA4
rs2229940446,993,349GABRA4
Rs16859834(C;C)446,993,349GABRA4
 On chromosomeChromosome positionIn geneSummary
rs80301361524,777,841
rs20757161526,869,757GABRA5
rs353998851526,915,388GABRA5
rs11066837131,768,766GABRA5
rs11066847131,768,906GABRA5
 On chromosomeChromosome positionIn geneSummary
rs19926475161,684,168GABRA6
rs32191515161,701,908GABRA6

beta[edit]

 On chromosomeChromosome positionIn geneSummary
rs11726563446,821,617COX7B2
rs9291296446,920,933GABRA4
rs7660336446,927,651GABRA4
Rs17599165(T;T)446,938,198GABRA4
rs17599165446,938,198GABRA4
rs1912960446,951,864GABRA4
Rs1912960(G;G)446,951,864GABRA4
rs2280073446,965,556GABRA4
rs2055942446,966,033GABRA4
Rs16859788(A;A)446,969,992GABRA4common in complete genomics
rs16859788446,969,992GABRA4
rs17599416446,971,421GABRA4
rs16859834446,993,349GABRA4
rs2229940446,993,349GABRA4
Rs16859834(C;C)446,993,349GABRA4
Rs2351299(G;T)447,141,348GABRB1possible reduced risk of Autism
rs2351299447,141,348GABRB1
Rs2351299(G;G)447,141,348GABRB1normal risk of autism
Rs2351299(T;T)447,141,348GABRB1possible reduced risk of autism
rs7435958447,158,992GABRB1
rs728293447,355,666GABRB1
rs6289447,406,692GABRB1
 On chromosomeChromosome positionIn geneSummary
rs22299445161,294,312GABRB2
rs18160715161,332,949GABRB2
Rs1816071(T;C)5161,332,949GABRB2
rs65565475161,333,168GABRB2
rs38119965161,548,936GABRB2
 On chromosomeChromosome positionIn geneSummary
rs356006651524,496,144
rs619965461526,558,984GABRB3
rs7970450451526,567,721GABRB3
Rs121913125(G;G)1526,580,351GABRB3common in clinvar
rs1219131251526,580,351GABRB3
rs80245641526,588,066GABRB3
rs8789601526,683,789GABRB3
rs116314211526,706,191GABRB3
rs9817781526,712,093GABRB3
rs80434401526,727,939GABRB3
rs9704081526,743,838GABRB3
rs32123371526,765,964GABRB3
rs32123351526,766,994GABRB3
Rs71651682(C;C)1526,772,759GABRB3common in complete genomics
rs716516821526,772,759GABRB3
rs1219131261526,773,681GABRB3
Rs25409(C;C)1526,773,694GABRB3
rs254091526,773,694GABRB3
Rs20317(C;C)1526,773,790GABRB3common in complete genomics
rs203171526,773,790GABRB3
rs81791841526,774,455GABRB3
Rs4906902(A;A)1526,774,621GABRB3common in complete genomics
rs49069021526,774,621GABRB3

gamma[edit]

 On chromosomeChromosome positionIn geneSummary
rs6447493446,040,928GABRG1
rs1497571446,057,233GABRG1
rs17536211446,085,716GABRG1
rs1391166446,103,850GABRG1
rs7654165446,125,050GABRG1
 On chromosomeChromosome positionIn geneSummary
rs1832945162,071,731GABRG2
rs2093565162,091,978GABRG2
rs7960525035162,093,940GABRG2
rs289330705162,093,965GABRG2
rs1219096735162,093,965GABRG2
Rs28933070(G;G)5162,093,965GABRG2
rs7960525185162,095,507GABRG2
rs7960525195162,095,516GABRG2
rs7960525055162,095,551GABRG2
rs7960525045162,097,716GABRG2
Rs267606837(C;C)5162,097,839GABRG2common in clinvar
rs2676068375162,097,839GABRG2
rs7504596315162,101,232GABRG2
rs2110375162,101,274GABRG2
rs2109875162,108,749GABRG2
rs4402185162,114,925GABRG2
rs24221065162,134,797GABRG2
rs7960525075162,142,163GABRG2
rs7960525085162,142,238GABRG2
rs7960525095162,142,313GABRG2
rs3975147375162,149,153GABRG2
Rs397514737(G;G)5162,149,153GABRG2common in clinvar
Rs121909672(A;A)5162,149,168GABRG2common in clinvar
rs1219096725162,149,168GABRG2
rs7680611565162,149,170GABRG2
rs2110145162,149,412GABRG2
rs1219096745162,153,132GABRG2
Rs121909674(C;C)5162,153,132GABRG2common in clinvar
rs7960525135162,153,237GABRG2
rs7960525155162,153,300GABRG2
rs4017505162,155,655GABRG2
 On chromosomeChromosome positionIn geneSummary
rs5877812231525,354,357UBE3A
rs5877812221525,354,395UBE3A
rs5877812201525,354,402UBE3A
rs5877812211525,354,402UBE3A
rs5877812191525,354,414UBE3A
rs5877812181525,354,562UBE3A
rs7970460851525,354,569UBE3A
rs5877812171525,354,571UBE3A
rs5877812161525,354,573UBE3A
rs5877812151525,354,645UBE3A
rs5877812371525,354,679UBE3A
rs5877805801525,354,685UBE3A
rs5877812141525,355,984UBE3A
rs5877812131525,355,984UBE3A
rs5877812361525,355,989UBE3A
rs5877812111525,355,993UBE3A
rs5877812121525,355,998UBE3A
rs5877812101525,356,043UBE3A
rs5877812091525,356,766UBE3A
rs8643095081525,356,778UBE3A
rs5877845201525,356,813UBE3A
rs5877829191525,356,827UBE3A
rs7947277381525,356,827UBE3A
rs5877812351525,356,840UBE3A
rs5877812081525,356,860UBE3A
rs5877845191525,356,860UBE3A
rs5877812441525,356,893UBE3A
rs5877805791525,356,898UBE3A
rs80250931525,357,803UBE3A
rs5877845181525,360,388UBE3A
rs5877812071525,360,433UBE3A
rs5877845161525,360,442UBE3A
rs5877812331525,360,443UBE3A
rs5877812061525,360,467UBE3A
rs5877845151525,360,477UBE3A
rs5877812051525,360,504UBE3A
rs5877845141525,360,509UBE3A
Rs398124438(GG;GG)1525,370,566UBE3Acommon in clinvar
rs3981244381525,370,566UBE3A
rs5877812041525,370,576UBE3A
rs5877812031525,370,608UBE3A
rs5877845131525,370,646UBE3A
rs5877812431525,370,684UBE3A
rs8632250681525,370,698UBE3A
rs5877812021525,370,727UBE3A
rs5877805851525,370,735UBE3A
rs5877805841525,370,741UBE3A
rs5877812011525,370,743UBE3A
rs5877812001525,370,752UBE3A
rs5877811991525,370,758UBE3A
... further results

other[edit]

 On chromosomeChromosome positionIn geneSummary
rs237680512,024,923GABRD
Rs121434580(A;A)12,027,636GABRDcommon in clinvar
rs12143458012,027,636GABRD
rs4130784612,028,260GABRD
Rs41307846(G;G)12,028,260GABRDcommon in complete genomics
rs14261955212,030,014GABRD
Rs142619552(C;C)12,030,014GABRDcommon in clinvar
rs237680312,036,515GABRD
 On chromosomeChromosome positionIn geneSummary
rs2256882X151,961,350GABRE
MIR452
rs1139916X151,969,707GABRE
 On chromosomeChromosome positionIn geneSummary
rs100361565170,788,634GABRP
rs111346545170,813,419GABRP
 On chromosomeChromosome positionIn geneSummary
rs3810651X152,652,814GABRQ

GABAA-rho[edit]

 On chromosomeChromosome positionIn geneSummary
rs1186902689,217,243GABRR1
rs12200969689,217,247GABRR1
rs404256689,948,064BACH2
rs6917758689,971,747BACH2
 On chromosomeChromosome positionIn geneSummary
rs282129689,257,779GABRR2
rs9342220690,062,093BACH2
 On chromosomeChromosome positionIn geneSummary
rs832032398,007,903GABRR3

GABAB[edit]

 On chromosomeChromosome positionIn geneSummary
rs606231121629,675,420ZFP57
rs3117292629,684,422
rs2747442629,685,409
rs3117294629,685,552
rs3129055629,702,484
rs9258122629,703,963
rs3131866629,703,963
 On chromosomeChromosome positionIn geneSummary
rs1435252998,341,309GABBR2
rs10986018998,361,054GABBR2
rs3780422998,380,522GABBR2
rs2491397998,442,880GABBR2
rs2779551998,490,944GABBR2
rs2779562998,515,399GABBR2
rs2808566998,515,611GABBR2
rs2184026998,542,066GABBR2
Rs2184026(C;C)998,542,066GABBR2common in complete genomics
Rs3750344(A;A)998,578,034GABBR2common in complete genomics
rs3750344998,578,034GABBR2
rs109890199100,214,259INVS
rs24910979100,240,169INVS
Rs2491097(C;C)9100,240,169INVScommon on affy axiom data
rs1219649959100,264,835INVS
Rs121964995(T;T)9100,264,835INVScommon in clinvar
Rs121964994(C;C)9100,284,342INVScommon in clinvar
rs1219649949100,284,342INVS
rs7555494449100,292,766INVS
Rs200844390(C;C)9100,292,952INVScommon in clinvar
rs2008443909100,292,952INVS
rs2676071859100,292,976INVS
Rs267607185(C;C)9100,292,976INVScommon in clinvar