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rs10188217

From SNPedia

Orientationplus
Stabilizedplus
Make rs10188217(C;C)
Make rs10188217(C;T)
Make rs10188217(T;T)
ReferenceGRCh38 38.1/141
Chromosome2
Position60990407
GenePUS10
is asnp
is mentioned by
dbSNPrs10188217
ebirs10188217
HLIrs10188217
Exacrs10188217
Varsomers10188217
Maprs10188217
PheGenIrs10188217
hapmaprs10188217
1000 genomesrs10188217
hgdprs10188217
ensemblrs10188217
gopubmedrs10188217
geneviewrs10188217
scholarrs10188217
googlers10188217
pharmgkbrs10188217
gwascentralrs10188217
openSNPrs10188217
23andMers10188217
23andMe allrs10188217
SNP Nexus

SNPshotrs10188217
SNPdbers10188217
MSV3drs10188217
GWAS Ctlgrs10188217
GMAF0.4665
Max Magnitude
? (C;C) (C;T) (T;T) 28
23andMe blog risk factors contributing to both celiac disease and Crohn’s disease in nearly 10,000 subjects with either disease and more than 10,000 healthy individuals, all of European ancestry. The CC genotypes at both rs10188217 and rs212388 were associated with slightly higher odds of either disease compared to the CT genotype, and the TT genotypes at both SNPs were associated with slightly lower odds.
GWAS snp
PMID [PMID 21298027OA-icon.png]
Trait
Title A Meta-Analysis of Genome-Wide Association Scans Identifies IL18RAP, PTPN2, TAGAP, and PUS10 As Shared Risk Loci for Crohn's Disease and Celiac Disease
Risk Allele C
P-val 1E-11
Odds Ratio None None


[PMID 19068216OA-icon.png] Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationship.