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rs102275

From SNPedia

Orientationminus
Stabilizedminus
Make rs102275(A;A)
Make rs102275(A;G)
Make rs102275(G;G)
ReferenceGRCh38 38.1/141
Chromosome11
Position61790331
GeneTMEM258
is asnp
is mentioned by
dbSNPrs102275
ebirs102275
HLIrs102275
Exacrs102275
Varsomers102275
Maprs102275
PheGenIrs102275
hapmaprs102275
1000 genomesrs102275
hgdprs102275
ensemblrs102275
gopubmedrs102275
geneviewrs102275
scholarrs102275
googlers102275
pharmgkbrs102275
gwascentralrs102275
openSNPrs102275
23andMers102275
23andMe allrs102275
SNP Nexus

SNPshotrs102275
SNPdbers102275
MSV3drs102275
GWAS Ctlgrs102275
GMAF0.4821
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 20694148OA-icon.png]
Trait
Title A genome-wide association study of the metabolic syndrome in Indian Asian men
Risk Allele
P-val 6E-7
Odds Ratio None None
GWAS snp
PMID [PMID 21102463OA-icon.png]
Trait
Title Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci
Risk Allele C
P-val 2E-11
Odds Ratio 1.0800 [1.04-1.12]
GWAS snp
PMID [PMID 21829377OA-icon.png]
Trait
Title Genetic Loci Associated with Plasma Phospholipid n-3 Fatty Acids: A Meta-Analysis of Genome-Wide Association Studies from the CHARGE Consortium.
Risk Allele T
P-val 7E-64
Odds Ratio 0.0200 [NR] % dcrease
GWAS snp
PMID [PMID 22359512OA-icon.png]
Trait
Title Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations.
Risk Allele
P-val 0
Odds Ratio 0 None

[PMID 19060906OA-icon.png] Common variants at 30 loci contribute to polygenic dyslipidemia.

[PMID 19060910OA-icon.png] Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.

[PMID 19750004OA-icon.png] A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia.

[PMID 19798445OA-icon.png] Genetic determinants of circulating sphingolipid concentrations in European populations.

GWAS snp
PMID [PMID 22916037OA-icon.png]
Trait Metabolite levels
Title Novel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Risk Allele
P-val 4E-264
Odds Ratio NR NR
GWAS snp
PMID [PMID 23362303OA-icon.png]
Trait Oleic acid (18:1n-9) plasma levels
Title Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium.
Risk Allele C
P-val 2E-32
Odds Ratio .23 [0.192-0.268] unit increase
GWAS snp
PMID [PMID 24823311OA-icon.png]
Trait Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid)
Title Genome-wide association study of plasma N6 polyunsaturated fatty acids within the cohorts for heart and aging research in genomic epidemiology consortium.
Risk Allele C
P-val 7E-147
Odds Ratio 2.49 [2.29-2.69] unit decrease