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rs1042821

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(C;C) 0 common in clinvar
Make rs1042821(C;T)
Make rs1042821(T;T)
ReferenceGRCh38.p2 38.2/144
Chromosome2
Position47783349
GeneMSH6
is asnp
is mentioned by
dbSNPrs1042821
ebirs1042821
HLIrs1042821
Exacrs1042821
Varsomers1042821
Maprs1042821
PheGenIrs1042821
hapmaprs1042821
1000 genomesrs1042821
hgdprs1042821
ensemblrs1042821
gopubmedrs1042821
geneviewrs1042821
scholarrs1042821
googlers1042821
pharmgkbrs1042821
gwascentralrs1042821
openSNPrs1042821
23andMers1042821
23andMe allrs1042821
SNP Nexus

SNPshotrs1042821
SNPdbers1042821
MSV3drs1042821
GWAS Ctlgrs1042821
Max Magnitude0

[PMID 26027715] Correlation between polymorphisms in DNA mismatch repair genes and the risk of primary hepatocellular carcinoma for the Han population in northern China

ClinVar
Risk rs1042821(G,T;G,T)
Alt rs1042821(G,T;G,T)
Reference rs1042821(C;C)
Significance Non-pathogenic
Disease Lynch syndrome not provided not specified Hereditary cancer-predisposing syndrome Lynch syndrome I
Variation info
Gene MSH6
CLNDBN Lynch syndrome not provided not specified Hereditary cancer-predisposing syndrome Lynch syndrome I
Reversed 1
HGVS NC_000002.11:g.48010488G>A
CLNSRC Inc. HGMD International Society for Gastrointestinal Hereditary Tumours
CLNACC RCV000030258.3, RCV000034489.1, RCV000035318.7, RCV000132091.3, RCV000144626.1,