rs10801575
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs10801575(C;C) |
| Make rs10801575(C;T) |
| Make rs10801575(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 196883651 |
| Gene | LOC100289145 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs10801575 |
| dbSNP (classic) | rs10801575 |
| ClinGen | rs10801575 |
| ebi | rs10801575 |
| HLI | rs10801575 |
| Exac | rs10801575 |
| Gnomad | rs10801575 |
| Varsome | rs10801575 |
| LitVar | rs10801575 |
| Map | rs10801575 |
| PheGenI | rs10801575 |
| Biobank | rs10801575 |
| 1000 genomes | rs10801575 |
| hgdp | rs10801575 |
| ensembl | rs10801575 |
| geneview | rs10801575 |
| scholar | rs10801575 |
| rs10801575 | |
| pharmgkb | rs10801575 |
| gwascentral | rs10801575 |
| openSNP | rs10801575 |
| 23andMe | rs10801575 |
| SNPshot | rs10801575 |
| SNPdbe | rs10801575 |
| MSV3d | rs10801575 |
| GWAS Ctlg | rs10801575 |
| GMAF | 0.376 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
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rs572515 was the most significantly associated with AMD risk (P <10-6).
rs9288410 and rs2014307 (PLEKHA1/HTRA1) on 10q26 were significantly associated with AMD status (P= .03 and P <10-6 respectively). After controlling for smoking history, gender and age, the most significant gene-gene interaction appears to be between rs10801575 (CFH) and rs2014307 (PLEKHA1/HTRA1) (P <10-11).
[PMID 18541031
] The NEI/NCBI dbGAP database: genotypes and haplotypes that may specifically predispose to risk of neovascular age-related macular degeneration.
