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rs10947262

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 1.3 1.3x increased risk for osteoarthritis
(T;T) 0
Make rs10947262(C;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position32405535
GeneBTNL2
is asnp
is mentioned by
dbSNPrs10947262
ebirs10947262
HLIrs10947262
Exacrs10947262
Varsomers10947262
Maprs10947262
PheGenIrs10947262
hapmaprs10947262
1000 genomesrs10947262
hgdprs10947262
ensemblrs10947262
gopubmedrs10947262
geneviewrs10947262
scholarrs10947262
googlers10947262
pharmgkbrs10947262
gwascentralrs10947262
openSNPrs10947262
23andMers10947262
23andMe allrs10947262
SNP Nexus

SNPshotrs10947262
SNPdbers10947262
MSV3drs10947262
GWAS Ctlgrs10947262
GMAF0.1703
Max Magnitude1.3
? (C;C) (C;T) (T;T) 28
rs10947262(C) was found to be associated with increased risk for osteoarthritis among Japanese and Europeans, with an odds ratio of 1.32 (CI: 1.19-1.46, combined p = 6.73×10e-8). This SNP is also in linkage disequilibrium with rs7775228, which was found to be associated in Japanese with osteoarthritis.[PMID 20305777OA-icon.png]
GWAS snp
PMID [PMID 20305777OA-icon.png]
Trait Knee osteoarthritis
Title New Sequence Variants in HLA Class II/III Region Associated with Susceptibility to Knee Osteoarthritis Identified by Genome-Wide Association Study
Risk Allele T
P-val 5E-9
Odds Ratio 1.31 [1.20-1.44]