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rs11175593

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs11175593(C;T)
Make rs11175593(T;T)
ReferenceGRCh38 38.1/141
Chromosome12
Position40208138
is asnp
is mentioned by
dbSNPrs11175593
ebirs11175593
HLIrs11175593
Exacrs11175593
Varsomers11175593
Maprs11175593
PheGenIrs11175593
hapmaprs11175593
1000 genomesrs11175593
hgdprs11175593
ensemblrs11175593
gopubmedrs11175593
geneviewrs11175593
scholarrs11175593
googlers11175593
pharmgkbrs11175593
gwascentralrs11175593
openSNPrs11175593
23andMers11175593
23andMe allrs11175593
SNP Nexus

SNPshotrs11175593
SNPdbers11175593
MSV3drs11175593
GWAS Ctlgrs11175593
GMAF0.04316
Max Magnitude0
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 18587394OA-icon.png]
Trait Crohn's disease
Title Genome-wide assocation defines more than 30 distinct susceptibility loci for Crohn's disease
Risk Allele T
P-val 3E-10
Odds Ratio 1.54 [NR]


[PMID 19068216OA-icon.png] Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationship.


[PMID 19474294OA-icon.png] Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.


[PMID 21304977OA-icon.png] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.


GET Evidence
rs11175593
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.047619
summary



[PMID 23619718] Genome-wide Association Study Signal at the 12q12 Locus for Crohn's Disease May Represent Associations with the MUC19 Gene


[PMID 22573572] Phenotype-genotype profiles in Crohn's disease predicted by genetic markers in autophagy-related genes (GOIA study II).


[PMID 22922229OA-icon.png] Seven newly identified loci for autoimmune thyroid disease.