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rs11568821

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(G;G) 0
Make rs11568821(A;A)
Make rs11568821(A;G)
ReferenceGRCh38 38.1/142
Chromosome2
Position241851760
GenePDCD1
is asnp
is mentioned by
dbSNPrs11568821
ebirs11568821
HLIrs11568821
Exacrs11568821
Varsomers11568821
Maprs11568821
PheGenIrs11568821
hapmaprs11568821
1000 genomesrs11568821
hgdprs11568821
ensemblrs11568821
gopubmedrs11568821
geneviewrs11568821
scholarrs11568821
googlers11568821
pharmgkbrs11568821
gwascentralrs11568821
openSNPrs11568821
23andMers11568821
23andMe allrs11568821
SNP Nexus

SNPshotrs11568821
SNPdbers11568821
MSV3drs11568821
GWAS Ctlgrs11568821
GMAF0.04821
Max Magnitude0
Abstract

intronic snp associated with systemic lupus erythematosus and rheumatoid arthritis.


[PMID 19581275] Association between a polymorphism in the human programmed death-1 (PD-1) gene and CMV infection after kidney transplantation


[PMID 15657875OA-icon.png] Polymorphisms in the tyrosine kinase 2 and interferon regulatory factor 5 genes are associated with systemic lupus erythematosus.


[PMID 17535987] Genomic polymorphism at the interferon-induced helicase (IFIH1) locus contributes to Graves' disease susceptibility.


[PMID 18045485OA-icon.png] The candidate genes TAF5L, TCF7, PDCD1, IL6 and ICAM1 cannot be excluded from having effects in type 1 diabetes.


[PMID 18401354] Analysis of the functional relevance of a putative regulatory SNP of PDCD1, PD1.3, associated with systemic lupus erythematosus.


[PMID 18456185OA-icon.png] Genetics and genomics of primary biliary cirrhosis.


[PMID 19234630OA-icon.png] PDCD1 genes may protect against extraocular manifestations in Chinese Han patients with Vogt-Koyanagi-Harada syndrome.


[PMID 23628397] Lack of association between CTLA-4 and PDCD1 polymorphisms and acute rejection in German liver transplant recipients


[PMID 24804191OA-icon.png] A Promoter Region Polymorphism in PDCD-1 Gene Is Associated with Risk of Rheumatoid Arthritis in the Han Chinese Population of Southeastern China


ClinVar
Risk rs11568821(A,C;A,C)
Alt rs11568821(A,C;A,C)
Reference rs11568821(G;G)
Significance Other
Disease Systemic lupus erythematosus Multiple sclerosis modifier of disease progression
Variation info
Gene PDCD1
CLNDBN Systemic lupus erythematosus, association wit 2 Multiple sclerosis modifier of disease progression
Reversed 1
HGVS NC_000002.11:g.242793912C>G
CLNSRC OMIM Allelic Variant
CLNACC RCV000009832.2, RCV000009833.5,



[PMID 26232179] The associations between PD-1, CTLA-4 gene polymorphisms and susceptibility to ankylosing spondylitis: a meta-analysis and systemic review