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rs12035082

From SNPedia

Orientationplus
Stabilizedplus
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ReferenceGRCh38 38.1/141
Chromosome1
Position172929237
is asnp
is mentioned by
dbSNPrs12035082
ebirs12035082
HLIrs12035082
Exacrs12035082
Varsomers12035082
Maprs12035082
PheGenIrs12035082
hapmaprs12035082
1000 genomesrs12035082
hgdprs12035082
ensemblrs12035082
gopubmedrs12035082
geneviewrs12035082
scholarrs12035082
googlers12035082
pharmgkbrs12035082
gwascentralrs12035082
openSNPrs12035082
23andMers12035082
23andMe allrs12035082
SNP Nexus

SNPshotrs12035082
SNPdbers12035082
MSV3drs12035082
GWAS Ctlgrs12035082
GMAF0.3388
Max Magnitude
? (C;C) (C;T) (T;T) 28

[PMID 19174780] Confirmation of multiple Crohn's disease susceptibility loci in a large Dutch-Belgian cohort

GWAS snp
PMID [PMID 17554261OA-icon.png]
Trait Crohn's disease
Title Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility
Risk Allele
P-val 1.9999999999999999E-7
Odds Ratio 1.14 [1.02-1.27]


[PMID 20650992] Association of IBD Risk Loci with Sarcoidosis and its Acute and Chronic Subphenotypes


[PMID 18438406OA-icon.png] Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease.


[PMID 18853133OA-icon.png] Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes.


[PMID 19140132OA-icon.png] Unbiased estimation of odds ratios: combining genomewide association scans with replication studies.


GET Evidence
rs12035082
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.648438
summary