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rs12046117

From SNPedia

Orientationplus
Stabilizedplus
Make rs12046117(C;C)
Make rs12046117(C;T)
Make rs12046117(T;T)
ReferenceGRCh38 38.1/141
Chromosome1
Position117208743
GeneVTCN1
is asnp
is mentioned by
dbSNPrs12046117
ebirs12046117
HLIrs12046117
Exacrs12046117
Varsomers12046117
Maprs12046117
PheGenIrs12046117
hapmaprs12046117
1000 genomesrs12046117
hgdprs12046117
ensemblrs12046117
gopubmedrs12046117
geneviewrs12046117
scholarrs12046117
googlers12046117
pharmgkbrs12046117
gwascentralrs12046117
openSNPrs12046117
23andMers12046117
23andMe allrs12046117
SNP Nexus

SNPshotrs12046117
SNPdbers12046117
MSV3drs12046117
GWAS Ctlgrs12046117
GMAF0.202
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19116933OA-icon.png]
Trait Juvenile idiopathic arthritis
Title Identification of a novel susceptibility locus for juvenile idiopathic arthritis by genome-wide association analysis
Risk Allele
P-val 0.000001
Odds Ratio 1.58 [1.29-1.94]



GET Evidence
rs12046117
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.195312
summary