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rs1250540

From SNPedia

Orientationminus
Stabilizedminus
Make rs1250540(C;C)
Make rs1250540(C;T)
Make rs1250540(T;T)
ReferenceGRCh38 38.1/142
Chromosome10
Position79276250
GeneZMIZ1
is asnp
is mentioned by
dbSNPrs1250540
ebirs1250540
HLIrs1250540
Exacrs1250540
Varsomers1250540
Maprs1250540
PheGenIrs1250540
hapmaprs1250540
1000 genomesrs1250540
hgdprs1250540
ensemblrs1250540
gopubmedrs1250540
geneviewrs1250540
scholarrs1250540
googlers1250540
pharmgkbrs1250540
gwascentralrs1250540
openSNPrs1250540
23andMers1250540
23andMe allrs1250540
SNP Nexus

SNPshotrs1250540
SNPdbers1250540
MSV3drs1250540
GWAS Ctlgrs1250540
GMAF0.315
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19525953OA-icon.png]
Trait Multiple sclerosis
Title Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci
Risk Allele G
P-val 0.000002
Odds Ratio 1.12 [1.02-1.22]


GET Evidence
rs1250540
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.258065
summary