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rs13017599

From SNPedia

Orientationplus
Stabilizedplus
Make rs13017599(A;A)
Make rs13017599(A;G)
Make rs13017599(G;G)
ReferenceGRCh38 38.1/141
Chromosome2
Position60937196
GeneREL
is asnp
is mentioned by
dbSNPrs13017599
ebirs13017599
HLIrs13017599
Exacrs13017599
Varsomers13017599
Maprs13017599
PheGenIrs13017599
hapmaprs13017599
1000 genomesrs13017599
hgdprs13017599
ensemblrs13017599
gopubmedrs13017599
geneviewrs13017599
scholarrs13017599
googlers13017599
pharmgkbrs13017599
gwascentralrs13017599
openSNPrs13017599
23andMers13017599
23andMe allrs13017599
SNP Nexus

SNPshotrs13017599
SNPdbers13017599
MSV3drs13017599
GWAS Ctlgrs13017599
GMAF0.1703
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 19503088OA-icon.png]
Trait Rheumatoid arthritis
Title REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis
Risk Allele A
P-val 2E-12
Odds Ratio 1.21 [1.15-1.28]
OMIM180300
Desc
Variant
Relatedalso
[PMID 22328738OA-icon.png] Comprehensive assessment of rheumatoid arthritis susceptibility loci in a large psoriatic arthritis cohort
GWAS snp
PMID [PMID 22170493OA-icon.png]
Trait
Title Genome-Wide Meta-Analysis of Psoriatic Arthritis Identifies Susceptibility Locus at REL.
Risk Allele
P-val 1E-8
Odds Ratio 1.2700 None


[PMID 19945995OA-icon.png] Confirmation of association of the REL locus with rheumatoid arthritis susceptibility in the UK population.


[PMID 21383967OA-icon.png] Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci.


GET Evidence
rs13017599
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.132812
summary