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rs1333042

From SNPedia

Orientationplus
Stabilizedplus
Make rs1333042(A;A)
Make rs1333042(A;G)
Make rs1333042(G;G)
ReferenceGRCh38 38.1/141
Chromosome9
Position22103814
GeneCDKN2B-AS1
is asnp
is mentioned by
dbSNPrs1333042
ebirs1333042
HLIrs1333042
Exacrs1333042
Varsomers1333042
Maprs1333042
PheGenIrs1333042
hapmaprs1333042
1000 genomesrs1333042
hgdprs1333042
ensemblrs1333042
gopubmedrs1333042
geneviewrs1333042
scholarrs1333042
googlers1333042
pharmgkbrs1333042
gwascentralrs1333042
openSNPrs1333042
23andMers1333042
23andMe allrs1333042
SNP Nexus

SNPshotrs1333042
SNPdbers1333042
MSV3drs1333042
GWAS Ctlgrs1333042
GMAF0.343
Max Magnitude
? (A;A) (A;G) (G;G) 28
Rs1333042
PubMed [PMID 17478681OA-icon.png]
Affy Probeset SNP_A-4215414
Affy Orientation same
On GW 5.0 1
Alleles A/B A/G
Ancestral A
Population CEU
Allele G
Case Freq.
Control Freq.
Odds Ratio Het 1.30
Odds Ratio Hom 1.54
Odds Ratio All 1.23
Disease Coronary artery disease (CAD)


rs1333042 increases susceptibility to Coronary artery disease 1.29 times for heterozygotes (AG) and 1.66 times for homozygotes (GG) [PMID 17478679]

rs1333042 increases susceptibility to Coronary artery disease 1.30 times for heterozygotes (AG) and 1.54 times for homozygotes (GG) [PMID 17478681OA-icon.png]

rs1333042 increases susceptibility to Myocardial Infarction 1.36 times for heterozygotes (AG) and 1.84 times for homozygotes (GG) [PMID 17478679]


[PMID 20696043OA-icon.png] Replication of the association of chromosomal region 9p21.3 with generalized aggressive periodontitis (gAgP) using an independent case-control cohort

OMIM170650
Desc
Variant
Relatedalso
[PMID 18987759OA-icon.png] Genetic testing for atherosclerosis risk: inevitability or pipe dream?


[PMID 19214202OA-icon.png] Identification of a shared genetic susceptibility locus for coronary heart disease and periodontitis.


[PMID 19578366OA-icon.png] Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.

GWAS snp
PMID [PMID 23364394]
Trait Coronary heart disease
Title A genome-wide association study of a coronary artery disease risk variant.
Risk Allele
P-val 1E-9
Odds Ratio 1.30 [1.19-1.41]


[PMID 22882272OA-icon.png] Genetic variants associated with myocardial infarction in the PSMA6 gene and Chr9p21 are also associated with ischaemic stroke.