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rs139315125

From SNPedia

Orientationplus
Geno Mag Summary
(A;A) 0 common in clinvar
Make rs139315125(A;G)
Make rs139315125(G;G)
ReferenceGRCh38.p2 38.2/146
Chromosome1
Position7809900
GenePER3
is asnp
is mentioned by
dbSNPrs139315125
ebirs139315125
HLIrs139315125
Exacrs139315125
Varsomers139315125
Maprs139315125
PheGenIrs139315125
hapmaprs139315125
1000 genomesrs139315125
hgdprs139315125
ensemblrs139315125
gopubmedrs139315125
geneviewrs139315125
scholarrs139315125
googlers139315125
pharmgkbrs139315125
gwascentralrs139315125
openSNPrs139315125
23andMers139315125
23andMe allrs139315125
SNP Nexus

SNPshotrs139315125
SNPdbers139315125
MSV3drs139315125
GWAS Ctlgrs139315125
Max Magnitude0
[PMID 26903630] A PERIOD3 variant causes a circadian phenotype and is associated with a seasonal mood trait: Based on transgenic mouse models and one family, the minor allele of rs139315125 was found in individuals with familial advanced sleep phase sleep disorder accompanied by higher Beck Depression Inventory and a tendency to seasonal affective disorder. Related blog post here.
ClinVar
Risk rs139315125(G;G)
Alt rs139315125(G;G)
Reference rs139315125(A;A)
Significance Pathogenic
Disease Advanced sleep phase syndrome
Variation info
Gene PER3
CLNDBN Advanced sleep phase syndrome, familial, 3
Reversed 0
HGVS NC_000001.10:g.7869960A>G
CLNSRC OMIM Allelic Variant
CLNACC RCV000210468.1,