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rs1412829

From SNPedia

Orientationminus
Stabilizedminus
Make rs1412829(C;C)
Make rs1412829(C;T)
Make rs1412829(T;T)
ReferenceGRCh38 38.1/141
Chromosome9
Position22043927
GeneCDKN2B-AS1
is asnp
is mentioned by
dbSNPrs1412829
ebirs1412829
HLIrs1412829
Exacrs1412829
Varsomers1412829
Maprs1412829
PheGenIrs1412829
hapmaprs1412829
1000 genomesrs1412829
hgdprs1412829
ensemblrs1412829
gopubmedrs1412829
geneviewrs1412829
scholarrs1412829
googlers1412829
pharmgkbrs1412829
gwascentralrs1412829
openSNPrs1412829
23andMers1412829
23andMe allrs1412829
SNP Nexus

SNPshotrs1412829
SNPdbers1412829
MSV3drs1412829
GWAS Ctlgrs1412829
GMAF0.2057
Max Magnitude
? (C;C) (C;T) (T;T) 28
23andMe blog rs1412829 G 1.22 Glioma
GWAS snp
PMID [PMID 19578366OA-icon.png]
Trait Glioma (high-grade)
Title Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility
Risk Allele C
P-val 2E-10
Odds Ratio 1.42 [1.27-1.58]
GWAS snp
PMID [PMID 20512145]
Trait Nasopharyngeal carcinoma
Title A genome-wide association study of nasopharyngeal carcinoma identifies three new susceptibility loci.
Risk Allele
P-val 5E-7
Odds Ratio 1.28 [1.18-1.41]
OMIM607107
Desc
Variant
Relatedalso
OMIM613030
Desc
Variant
Relatedalso
[PMID 18426861OA-icon.png] Association analysis of type 2 diabetes Loci in type 1 diabetes.


[PMID 18694974OA-icon.png] Predicting type 2 diabetes based on polymorphisms from genome-wide association studies: a population-based study.


[PMID 19341491OA-icon.png] Genome-based prediction of common diseases: methodological considerations for future research.


[PMID 20212223] New insights into susceptibility to glioma.


[PMID 21278902OA-icon.png] Genetic risk profiling for prediction of type 2 diabetes.


GET Evidence
rs1412829
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.265625
summary



[PMID 26014354] CCDC26, CDKN2BAS, RTEL1 and TERT Polymorphisms in pediatric brain tumor susceptibility


[PMID 26839018] Genetic risk variants in the CDKN2A/B, RTEL1 and EGFR genes are associated with somatic biomarkers in glioma.


[PMID 27517745] Nasopharyngeal carcinoma risk prediction via salivary detection of host and Epstein-Barr virus genetic variants.