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rs16851009

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs16851009(C;T)
Make rs16851009(T;T)
ReferenceGRCh38 38.1/141
Chromosome2
Position165774197
GeneGALNT3, LOC102724230
is asnp
is mentioned by
dbSNPrs16851009
ebirs16851009
HLIrs16851009
Exacrs16851009
Varsomers16851009
Maprs16851009
PheGenIrs16851009
hapmaprs16851009
1000 genomesrs16851009
hgdprs16851009
ensemblrs16851009
gopubmedrs16851009
geneviewrs16851009
scholarrs16851009
googlers16851009
pharmgkbrs16851009
gwascentralrs16851009
openSNPrs16851009
23andMers16851009
23andMe allrs16851009
SNP Nexus

SNPshotrs16851009
SNPdbers16851009
MSV3drs16851009
GWAS Ctlgrs16851009
GMAF0.1814
Max Magnitude0
? (C;C) (C;T) (T;T) 28
Rs16851009
PubMed [PMID 16252231OA-icon.png]
Affy Probeset SNP_A-8294813
Affy Orientation reverse
On GW 5.0
Alleles A/B A/G
Ancestral C
Population
Allele T
Case Freq. 0.13
Control Freq. 0.08
Odds Ratio Het
Odds Ratio Hom
Odds Ratio All 1.84
Disease Parkinson's disease (PKD)


rs16851009 increases susceptibility to Parkinson's disease 1.84 times for carriers of the T allele [PMID 16252231OA-icon.png]

[PMID 16685661OA-icon.png] Genomewide association, Parkinson disease, and PARK10.

[PMID 16685662OA-icon.png] No evidence for association with Parkinson disease for 13 single-nucleotide polymorphisms identified by whole-genome association screening.

[PMID 16685663OA-icon.png] A case-control association study of the 12 single-nucleotide polymorphisms implicated in Parkinson disease by a recent genome scan.