rs16904316
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common genotype |
| Make rs16904316(C;T) |
| Make rs16904316(T;T) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 8 |
| Position | 130605604 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16904316 |
| dbSNP (classic) | rs16904316 |
| ClinGen | rs16904316 |
| ebi | rs16904316 |
| HLI | rs16904316 |
| Exac | rs16904316 |
| Gnomad | rs16904316 |
| Varsome | rs16904316 |
| LitVar | rs16904316 |
| Map | rs16904316 |
| PheGenI | rs16904316 |
| Biobank | rs16904316 |
| 1000 genomes | rs16904316 |
| hgdp | rs16904316 |
| ensembl | rs16904316 |
| geneview | rs16904316 |
| scholar | rs16904316 |
| rs16904316 | |
| pharmgkb | rs16904316 |
| gwascentral | rs16904316 |
| openSNP | rs16904316 |
| 23andMe | rs16904316 |
| SNPshot | rs16904316 |
| SNPdbe | rs16904316 |
| MSV3d | rs16904316 |
| GWAS Ctlg | rs16904316 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19901119 ]
|
| Trait | Methotrexate phramacokinetics (acute lymphoblastic leukemia) |
| Title | Germline genetic variation in an organic anion transporter polypeptide associated with methotrexate pharmacokinetics and clinical effects. |
| Risk Allele | C |
| P-val | 2E-6 |
| Odds Ratio | NR NR |
