rs174538
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs174538(A;A) |
| Make rs174538(A;G) |
| Make rs174538(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 61792609 |
| Gene | FEN1, MIR611, TMEM258 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs174538 |
| dbSNP (classic) | rs174538 |
| ClinGen | rs174538 |
| ebi | rs174538 |
| HLI | rs174538 |
| Exac | rs174538 |
| Gnomad | rs174538 |
| Varsome | rs174538 |
| LitVar | rs174538 |
| Map | rs174538 |
| PheGenI | rs174538 |
| Biobank | rs174538 |
| 1000 genomes | rs174538 |
| hgdp | rs174538 |
| ensembl | rs174538 |
| geneview | rs174538 |
| scholar | rs174538 |
| rs174538 | |
| pharmgkb | rs174538 |
| gwascentral | rs174538 |
| openSNP | rs174538 |
| 23andMe | rs174538 |
| SNPshot | rs174538 |
| SNPdbe | rs174538 |
| MSV3d | rs174538 |
| GWAS Ctlg | rs174538 |
| GMAF | 0.314 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21829377 ]
|
| Trait | |
| Title | Genetic Loci Associated with Plasma Phospholipid n-3 Fatty Acids: A Meta-Analysis of Genome-Wide Association Studies from the CHARGE Consortium. |
| Risk Allele | A |
| P-val | 5E-58 |
| Odds Ratio | 0.0800 [NR] % decrease |
[PMID 19618370] Functional FEN1 polymorphisms are associated with DNA damage levels and lung cancer risk.
[PMID 24022861] An NEIL1 single nucleotide polymorphism (rs4462560) predicts the risk of radiation-induced toxicities in esophageal cancer patients treated with definitive radiotherapy
| GWAS snp | |
|---|---|
| PMID | [PMID 24816252]
|
| Trait | Blood metabolite levels |
| Title | An atlas of genetic influences on human blood metabolites. |
| Risk Allele | A |
| P-val | 9E-14 |
| Odds Ratio | .03 [0.018-0.034] unit decrease |
[PMID 29937070] Base Excision Repair Gene Polymorphisms and Wilms Tumor Susceptibility.
[PMID 31991592] Genome-Wide Association Study for Serum Omega-3 and Omega-6 Polyunsaturated Fatty Acids: Exploratory Analysis of the Sex-Specific Effects and Dietary Modulation in Mediterranean Subjects with Metabolic Syndrome.
