Have questions? Visit https://www.reddit.com/r/SNPedia

rs17562004

From SNPedia

Orientationplus
Stabilizedplus
Make rs17562004(A;A)
Make rs17562004(A;G)
Make rs17562004(G;G)
ReferenceGRCh38 38.1/141
Chromosome7
Position7862738
GeneMPP3
is asnp
is mentioned by
dbSNPrs17562004
ebirs17562004
HLIrs17562004
Exacrs17562004
Varsomers17562004
Maprs17562004
PheGenIrs17562004
hapmaprs17562004
1000 genomesrs17562004
hgdprs17562004
ensemblrs17562004
gopubmedrs17562004
geneviewrs17562004
scholarrs17562004
googlers17562004
pharmgkbrs17562004
gwascentralrs17562004
openSNPrs17562004
23andMers17562004
23andMe allrs17562004
SNP Nexus

SNPshotrs17562004
SNPdbers17562004
MSV3drs17562004
GWAS Ctlgrs17562004
GMAF0.2016
Max Magnitude
? (A;A) (A;G) (G;G) 28
Rs17562004
PubMed [PMID 17876339]
Affy Probeset SNP_A-1820918
Affy Orientation same
On GW 5.0 1
Alleles A/B A/G
Ancestral G
Population
Allele A
Case Freq.
Control Freq.
Odds Ratio Het 1.20
Odds Ratio Hom 1.50
Odds Ratio All
Disease Prostate cancer (PC)


rs17562004 is in linkage disequilibrium with a polymorphism that increases susceptibility to Prostate cancer 1.20 times for heterozygotes (AG) and 1.50 times for homozygotes (AA) [PMID 17876339]