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rs1790100

From SNPedia

Orientationplus
Stabilizedplus
Make rs1790100(G;G)
Make rs1790100(G;T)
Make rs1790100(T;T)
ReferenceGRCh38 38.1/141
Chromosome12
Position123172178
GeneMPHOSPH9
is asnp
is mentioned by
dbSNPrs1790100
ebirs1790100
HLIrs1790100
Exacrs1790100
Varsomers1790100
Maprs1790100
PheGenIrs1790100
hapmaprs1790100
1000 genomesrs1790100
hgdprs1790100
ensemblrs1790100
gopubmedrs1790100
geneviewrs1790100
scholarrs1790100
googlers1790100
pharmgkbrs1790100
gwascentralrs1790100
openSNPrs1790100
23andMers1790100
23andMe allrs1790100
SNP Nexus

SNPshotrs1790100
SNPdbers1790100
MSV3drs1790100
GWAS Ctlgrs1790100
GMAF0.3136
Max Magnitude
? (G;G) (G;T) (T;T) 28
GWAS snp
PMID [PMID 19525953OA-icon.png]
Trait Multiple sclerosis
Title Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci
Risk Allele G
P-val 7E-7
Odds Ratio 1.11 [1.00-1.22]


GET Evidence
rs1790100
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.585938
summary