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rs1880887

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) 0 common in complete genomics
Make rs1880887(A;G)
Make rs1880887(G;G)
ReferenceGRCh38 38.1/141
Chromosome12
Position41327628
GenePDZRN4
is asnp
is mentioned by
dbSNPrs1880887
ebirs1880887
HLIrs1880887
Exacrs1880887
Varsomers1880887
Maprs1880887
PheGenIrs1880887
hapmaprs1880887
1000 genomesrs1880887
hgdprs1880887
ensemblrs1880887
gopubmedrs1880887
geneviewrs1880887
scholarrs1880887
googlers1880887
pharmgkbrs1880887
gwascentralrs1880887
openSNPrs1880887
23andMers1880887
23andMe allrs1880887
SNP Nexus

SNPshotrs1880887
SNPdbers1880887
MSV3drs1880887
GWAS Ctlgrs1880887
GMAF0.1194
Max Magnitude0
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 18464913OA-icon.png]
Trait Protein quantitative trait loci
Title A Genome-Wide Association Study Identifies Protein Quantitative Trait Loci (pQTLs)
Risk Allele
P-val 1E-10
Odds Ratio NR NR

[PMID 18464913OA-icon.png] Alkaline phosphatase protein levels


GET Evidence
rs1880887
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.785714
summary