Have questions? Visit https://www.reddit.com/r/SNPedia

rs1980493

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) 0 common on affy axiom data
Make rs1980493(A;G)
Make rs1980493(G;G)
ReferenceGRCh38 38.1/141
Chromosome6
Position32395438
GeneBTNL2
is asnp
is mentioned by
dbSNPrs1980493
ebirs1980493
HLIrs1980493
Exacrs1980493
Varsomers1980493
Maprs1980493
PheGenIrs1980493
hapmaprs1980493
1000 genomesrs1980493
hgdprs1980493
ensemblrs1980493
gopubmedrs1980493
geneviewrs1980493
scholarrs1980493
googlers1980493
pharmgkbrs1980493
gwascentralrs1980493
openSNPrs1980493
23andMers1980493
23andMe allrs1980493
SNP Nexus

SNPshotrs1980493
SNPdbers1980493
MSV3drs1980493
GWAS Ctlgrs1980493
GMAF0.08907
Max Magnitude0
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 19287509OA-icon.png]
Trait Anti-cyclic Citrullianted Peptide Antibody
Title Genome Wide Association Study of Determinants of Anti-cyclic Citrullinated Peptide Antibody Titer in Adults with Rheumatoid Arthritis
Risk Allele
P-val 5E-7
Odds Ratio NR NR


[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.

[PMID 20018075OA-icon.png] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.


GET Evidence
rs1980493
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.046875
summary