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rs198846

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 3
(A;G) 2
(G;G) 0
ReferenceGRCh38 38.1/141
Chromosome6
Position26107235
GeneHIST1H1T
is asnp
is mentioned by
dbSNPrs198846
ebirs198846
HLIrs198846
Exacrs198846
Varsomers198846
Maprs198846
PheGenIrs198846
hapmaprs198846
1000 genomesrs198846
hgdprs198846
ensemblrs198846
gopubmedrs198846
geneviewrs198846
scholarrs198846
googlers198846
pharmgkbrs198846
gwascentralrs198846
openSNPrs198846
23andMers198846
23andMe allrs198846
SNP Nexus

SNPshotrs198846
SNPdbers198846
MSV3drs198846
GWAS Ctlgrs198846
GMAF0.124
Max Magnitude3
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 19820698OA-icon.png]
Trait Hemoglobin levels
Title Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels
Risk Allele A
P-val 1E-8
Odds Ratio NR NR
GWAS snp
PMID [PMID 21909110OA-icon.png]
Trait
Title Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure.
Risk Allele G
P-val 2E-12
Odds Ratio 0.4780 [0.35-0.61] mmHg decrease


GET Evidence
rs198846
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.890625
summary



GWAS snp
PMID [PMID 20139978]
Trait Mean corpuscular volume
Title Genome-wide association study of hematological and biochemical traits in a Japanese population.
Risk Allele A
P-val 2E-6
Odds Ratio .68 [0.402-0.956] unit increase