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rs2000999

From SNPedia

Orientationplus
Stabilizedplus
Make rs2000999(A;A)
Make rs2000999(A;G)
Make rs2000999(G;G)
ReferenceGRCh38 38.1/141
Chromosome16
Position72074194
GeneHPR
is asnp
is mentioned by
dbSNPrs2000999
ebirs2000999
HLIrs2000999
Exacrs2000999
Varsomers2000999
Maprs2000999
PheGenIrs2000999
hapmaprs2000999
1000 genomesrs2000999
hgdprs2000999
ensemblrs2000999
gopubmedrs2000999
geneviewrs2000999
scholarrs2000999
googlers2000999
pharmgkbrs2000999
gwascentralrs2000999
openSNPrs2000999
23andMers2000999
23andMe allrs2000999
SNP Nexus

SNPshotrs2000999
SNPdbers2000999
MSV3drs2000999
GWAS Ctlgrs2000999
GMAF0.197
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 20686565OA-icon.png]
Trait
Title Biological, clinical and population relevance of 95 loci for blood lipids.
Risk Allele A
P-val 2E-22
Odds Ratio 2.0000 None
GWAS snp
PMID [PMID 22403646OA-icon.png]
Trait
Title A genome-wide association study identifies rs2000999 as a strong genetic determinant of circulating haptoglobin levels.
Risk Allele A
P-val 8E-59
Odds Ratio 0.1380 None


[PMID 22579477] Clinical necessity of partitioning of human plasma haptoglobin reference intervals by recently-discovered rs2000999.


[PMID 20066028OA-icon.png] Modeling of environmental effects in genome-wide association studies identifies SLC2A2 and HP as novel loci influencing serum cholesterol levels.


[PMID 22433445OA-icon.png] Complexity of a complex trait locus: HP, HPR, haemoglobin and cholesterol.

GWAS snp
PMID [PMID 24097068OA-icon.png]
Trait Cholesterol, total
Title Discovery and refinement of loci associated with lipid levels.
Risk Allele A
P-val 7E-41
Odds Ratio .06 [NR] unit increase