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rs2017698

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in clinvar
Make rs2017698(C;T)
Make rs2017698(T;T)
ReferenceGRCh38 38.1/141
Chromosome19
Position49834979
GeneMED25
is asnp
is mentioned by
dbSNPrs2017698
ebirs2017698
HLIrs2017698
Exacrs2017698
Varsomers2017698
Maprs2017698
PheGenIrs2017698
hapmaprs2017698
1000 genomesrs2017698
hgdprs2017698
ensemblrs2017698
gopubmedrs2017698
geneviewrs2017698
scholarrs2017698
googlers2017698
pharmgkbrs2017698
gwascentralrs2017698
openSNPrs2017698
23andMers2017698
23andMe allrs2017698
SNP Nexus

SNPshotrs2017698
SNPdbers2017698
MSV3drs2017698
GWAS Ctlgrs2017698
GMAF0.008264
Max Magnitude0
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 23720494OA-icon.png]
Trait Blood trace element (Se levels)
Title Genome-wide association study identifies loci affecting blood copper, selenium and zinc.
Risk Allele
P-val 1E-7
Odds Ratio .49 [0.31-0.67] unit increase


ClinVar
Risk rs2017698(T;T)
Alt rs2017698(T;T)
Reference rs2017698(C;C)
Significance Non-pathogenic
Disease Charcot-Marie-Tooth disease
Variation info
Gene MED25
CLNDBN Charcot-Marie-Tooth disease, type 2
Reversed 0
HGVS NC_000019.9:g.50338236C>T
CLNSRC
CLNACC RCV000204774.2,