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rs2073838

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(G;G) 0
Make rs2073838(A;A)
Make rs2073838(A;G)
ReferenceGRCh38 38.1/141
Chromosome5
Position132313529
GeneMIR4750, SLC22A4
is asnp
is mentioned by
dbSNPrs2073838
ebirs2073838
HLIrs2073838
Exacrs2073838
Varsomers2073838
Maprs2073838
PheGenIrs2073838
hapmaprs2073838
1000 genomesrs2073838
hgdprs2073838
ensemblrs2073838
gopubmedrs2073838
geneviewrs2073838
scholarrs2073838
googlers2073838
pharmgkbrs2073838
gwascentralrs2073838
openSNPrs2073838
23andMers2073838
23andMe allrs2073838
SNP Nexus

SNPshotrs2073838
SNPdbers2073838
MSV3drs2073838
GWAS Ctlgrs2073838
GMAF0.1318
Max Magnitude0
? (A;A) (A;G) (G;G) 28
[PMID 18709696] rs2073838 and rs3792876 replicated for rheumatoid arthritis in Japanese, but not Caucasian populations.



[PMID 16380915OA-icon.png] Replication of putative candidate-gene associations with rheumatoid arthritis in >4,000 samples from North America and Sweden: association of susceptibility with PTPN22, CTLA4, and PADI4.


[PMID 16519819OA-icon.png] Analysis of polymorphisms in 16 genes in type 1 diabetes that have been associated with other immune-mediated diseases.


[PMID 18466472OA-icon.png] Constructing gene association networks for rheumatoid arthritis using the backward genotype-trait association (BGTA) algorithm.


[PMID 18466513OA-icon.png] Evaluating gene x gene and gene x smoking interaction in rheumatoid arthritis using candidate genes in GAW15.


[PMID 18466554OA-icon.png] Analyses of single marker and pairwise effects of candidate loci for rheumatoid arthritis using logistic regression and random forests.


[PMID 19956108OA-icon.png] Analysis of 55 autoimmune disease and type II diabetes loci: further confirmation of chromosomes 4q27, 12q13.2 and 12q24.13 as type I diabetes loci, and support for a new locus, 12q13.3-q14.1.


[PMID 20018049OA-icon.png] Evaluation of an optimal receiver operating characteristic procedure.


[PMID 20018071OA-icon.png] Allelic based gene-gene interactions in rheumatoid arthritis.


GET Evidence
rs2073838
aa_change
aa_change_short
impact pharmacogenetic
qualified_impact Insufficiently evaluated pharmacogenetic
overall_frequency 0.0859375
summary



[PMID 25707686] Association of joint erosion with SLC22A4 gene polymorphisms inconsistently associated with rheumatoid arthritis susceptibility