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rs2107538

From SNPedia

Orientationplus
Stabilizedplus
Make rs2107538(C;C)
Make rs2107538(C;T)
Make rs2107538(T;T)
ReferenceGRCh38 38.1/141
Chromosome17
Position35880776
GeneCCL5
is asnp
is mentioned by
dbSNPrs2107538
ebirs2107538
HLIrs2107538
Exacrs2107538
Varsomers2107538
Maprs2107538
PheGenIrs2107538
hapmaprs2107538
1000 genomesrs2107538
hgdprs2107538
ensemblrs2107538
gopubmedrs2107538
geneviewrs2107538
scholarrs2107538
googlers2107538
pharmgkbrs2107538
gwascentralrs2107538
openSNPrs2107538
23andMers2107538
23andMe allrs2107538
SNP Nexus

SNPshotrs2107538
SNPdbers2107538
MSV3drs2107538
GWAS Ctlgrs2107538
GMAF0.2828
Max Magnitude
? (C;C) (C;T) (T;T) 28
discussed in the 23andMe blog
  • TT Increased CCL5 levels; increased rate of HIV disease progression
OMIM187011
DescCHEMOKINE, CC MOTIF, LIGAND 5; CCL5
Variant
Relatedalso


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[PMID 21547257OA-icon.png] CCL5/RANTES Gene Polymorphisms in Slavonic Patients with Myocardial Infarction


[PMID 15726497OA-icon.png] Gene-environment interaction effects on the development of immune responses in the 1st year of life.


[PMID 16078996OA-icon.png] Association study of functional genetic variants of innate immunity related genes in celiac disease.


[PMID 16719905OA-icon.png] Association study of genetic variants of pro-inflammatory chemokine and cytokine genes in systemic lupus erythematosus.


[PMID 16773571OA-icon.png] Genetic variation in the CCL18-CCL3-CCL4 chemokine gene cluster influences HIV Type 1 transmission and AIDS disease progression.


[PMID 16855620] Genetic variants of RANTES are associated with serum RANTES level and protection for type 1 diabetes.


[PMID 17540042OA-icon.png] The association of RANTES polymorphism with severe acute respiratory syndrome in Hong Kong and Beijing Chinese.


[PMID 17705862OA-icon.png] Optimization of candidate-gene SNP-genotyping by flexible oligonucleotide microarrays; analyzing variations in immune regulator genes of hay-fever samples.


[PMID 17848170OA-icon.png] The chemokine network. II. On how polymorphisms and alternative splicing increase the number of molecular species and configure intricate patterns of disease susceptibility.


[PMID 17984846] Single nucleotide polymorphism of CC chemokine ligand 5 promoter gene in recipients may predict the risk of chronic graft-versus-host disease and its severity after allogeneic transplantation.


[PMID 18217191] Association of CC chemokine ligand 5 genotype with urinary albumin excretion in the non-diabetic Japanese general population: the Takahata study.


[PMID 18805939OA-icon.png] Functional genetic polymorphisms and female reproductive disorders: part II--endometriosis.


[PMID 19347053OA-icon.png] Analysis of inflammation- and atherosclerosis-related gene polymorphisms in branch retinal vein occlusion.


[PMID 20041166OA-icon.png] Common genetic variation and the control of HIV-1 in humans.


[PMID 20805685] Significant associations between CCL5 gene polymorphisms and post-transplantational diabetes mellitus in Korean renal allograft recipients.


[PMID 21376715] The RANTES gene promoter polymorphisms are associated with the risk of atherothrombotic cerebral infarction in Northern Han Chinese.


[PMID 23168091OA-icon.png] Chemokine Ligand 5 (CCL5) and Chemokine Receptor (CCR5) Genetic Variants and Prostate Cancer Risk among men of African Descent: A Case-Control Study


[PMID 23906684] Genetic associations with coronary heart disease: Meta-analyses of 12 candidate genetic variants


[PMID 23957698] Association Study of Chemokine (C-C motif) Ligand 5 Gene Polymorphism and Papillary Thyroid Cancer


[PMID 23133602OA-icon.png] Pharmacogenetics of efficacy and safety of HCV treatment in HCV-HIV coinfected patients: significant associations with IL28B and SOCS3 gene variants.


[PMID 23198952] Association of CXCL1 promoter polymorphism with ischaemic stroke in Korean population.


[PMID 23207898] RANTES polymorphisms and the risk of graft-versus-host disease in human leukocyte antigen-matched sibling allogeneic hematopoietic stem cell transplantation.


[PMID 23663310OA-icon.png] Investigating highly replicated asthma genes as candidate genes for allergic rhinitis.


[PMID 27472286] CCL2, CCL5, IL4 and IL15 Gene Polymorphisms in Women with Gestational Diabetes Mellitus.