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rs2180439

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 2 Reduced risk of Male Pattern Baldness.
(C;T) 2.5 Increased risk of Male Pattern Baldness.
(T;T) 3 2x increased risk of Male Pattern Baldness.
ReferenceGRCh38 38.1/141
Chromosome20
Position21872462
is asnp
is mentioned by
dbSNPrs2180439
ebirs2180439
HLIrs2180439
Exacrs2180439
Varsomers2180439
Maprs2180439
PheGenIrs2180439
hapmaprs2180439
1000 genomesrs2180439
hgdprs2180439
ensemblrs2180439
gopubmedrs2180439
geneviewrs2180439
scholarrs2180439
googlers2180439
pharmgkbrs2180439
gwascentralrs2180439
openSNPrs2180439
23andMers2180439
23andMe allrs2180439
SNP Nexus

SNPshotrs2180439
SNPdbers2180439
MSV3drs2180439
GWAS Ctlgrs2180439
GMAF0.4421
Max Magnitude3
? (C;C) (C;T) (T;T) 28
spitoon rs2180439(T;T) have 2x increased odds of male pattern baldness.
GWAS snp
PMID [PMID 18849994]
Trait Male-pattern baldness
Title Susceptibility variants for male-pattern baldness on chromosome 20p11
Risk Allele C
P-val 2.9999999999999998E-15
Odds Ratio 1.82 [1.45-2.30]
OMIM612421
DescALOPECIA, ANDROGENETIC, 3; AGA3
Variant
Relatedalso



GWAS snp
PMID [PMID 22032556]
Trait
Title Susceptibility variants on chromosome 7p21.1 suggest HDAC9 as a new candidate gene for male-pattern baldness.
Risk Allele
P-val 4E-17
Odds Ratio 2.0800 None


GET Evidence
rs2180439
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.625
summary positively linked to male pattern baldness