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rs2227139

From SNPedia

Orientationminus
Stabilizedminus
Make rs2227139(C;C)
Make rs2227139(C;T)
Make rs2227139(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position32445682
GeneHLA-DRA
is asnp
is mentioned by
dbSNPrs2227139
ebirs2227139
HLIrs2227139
Exacrs2227139
Varsomers2227139
Maprs2227139
PheGenIrs2227139
hapmaprs2227139
1000 genomesrs2227139
hgdprs2227139
ensemblrs2227139
gopubmedrs2227139
geneviewrs2227139
scholarrs2227139
googlers2227139
pharmgkbrs2227139
gwascentralrs2227139
openSNPrs2227139
23andMers2227139
23andMe allrs2227139
SNP Nexus

SNPshotrs2227139
SNPdbers2227139
MSV3drs2227139
GWAS Ctlgrs2227139
GMAF0.3678
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19820697OA-icon.png]
Trait Hematological parameters
Title A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium
Risk Allele G
P-val 1E-7
Odds Ratio 0.02 [0.01-0.03] 10^9/l increase


[PMID 19728873OA-icon.png] Otitis media: a genome-wide linkage scan with evidence of susceptibility loci within the 17q12 and 10q22.3 regions.


[PMID 20593013OA-icon.png] A major histocompatibility Class I locus contributes to multiple sclerosis susceptibility independently from HLA-DRB1*15:01.


[PMID 21436341] Genetic correlations of brain lesion distribution in multiple sclerosis: an exploratory study.


GET Evidence
rs2227139
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.664062
summary