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rs2233287

From SNPedia

Orientationminus
Stabilizedminus
Make rs2233287(C;C)
Make rs2233287(C;T)
Make rs2233287(T;T)
ReferenceGRCh38 38.1/141
Chromosome5
Position151060536
GeneTNIP1
is asnp
is mentioned by
dbSNPrs2233287
ebirs2233287
HLIrs2233287
Exacrs2233287
Varsomers2233287
Maprs2233287
PheGenIrs2233287
hapmaprs2233287
1000 genomesrs2233287
hgdprs2233287
ensemblrs2233287
gopubmedrs2233287
geneviewrs2233287
scholarrs2233287
googlers2233287
pharmgkbrs2233287
gwascentralrs2233287
openSNPrs2233287
23andMers2233287
23andMe allrs2233287
SNP Nexus

SNPshotrs2233287
SNPdbers2233287
MSV3drs2233287
GWAS Ctlgrs2233287
GMAF0.09688
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 21750679OA-icon.png]
Trait
Title Genome-wide scan identifies TNIP1, PSORS1C1, and RHOB as novel risk loci for systemic sclerosis.
Risk Allele A
P-val 5E-9
Odds Ratio 1.3100 [1.15-1.43]


[PMID 20159110OA-icon.png] Allelic skewing of DNA methylation is widespread across the genome.


[PMID 22896740OA-icon.png] Confirmation of TNIP1 but not RHOB and PSORS1C1 as systemic sclerosis risk factors in a large independent replication study