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rs2282440

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs2282440(C;T)
Make rs2282440(T;T)
ReferenceGRCh38 38.1/141
Chromosome1
Position30874473
GeneSDC3
is asnp
is mentioned by
dbSNPrs2282440
ebirs2282440
HLIrs2282440
Exacrs2282440
Varsomers2282440
Maprs2282440
PheGenIrs2282440
hapmaprs2282440
1000 genomesrs2282440
hgdprs2282440
ensemblrs2282440
gopubmedrs2282440
geneviewrs2282440
scholarrs2282440
googlers2282440
pharmgkbrs2282440
gwascentralrs2282440
openSNPrs2282440
23andMers2282440
23andMe allrs2282440
SNP Nexus

SNPshotrs2282440
SNPdbers2282440
MSV3drs2282440
GWAS Ctlgrs2282440
GMAF0.1804
Max Magnitude0
? (C;C) (C;T) (T;T) 28
OMIM186357
DescSYNDECAN 3; SDC3
Variant
Relatedalso
OMIM186357
Desc
Variant0001
Relatedalso


ClinVar
Risk rs2282440(T;T)
Alt rs2282440(T;T)
Reference rs2282440(C;C)
Significance Other
Disease Obesity
Variation info
Gene SDC3
CLNDBN Obesity, association with
Reversed 1
HGVS NC_000001.10:g.31347320G>A
CLNSRC OMIM Allelic Variant
CLNACC RCV000013592.17,



[PMID 17018662] Positive association of obesity with single nucleotide polymorphisms of syndecan 3 in the Korean population.


GET Evidence
SDC3-T329I
aa_change Thr329Ile
aa_change_short T329I
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.00892359
summary



[PMID 27515755] Study of seven single-nucleotide polymorphisms identified in East Asians for association with obesity in a Taiwanese population.