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rs229527

From SNPedia

Orientationminus
Stabilizedminus
Make rs229527(G;G)
Make rs229527(G;T)
Make rs229527(T;T)
ReferenceGRCh38 38.1/141
Chromosome22
Position37185445
GeneC1QTNF6
is asnp
is mentioned by
dbSNPrs229527
ebirs229527
HLIrs229527
Exacrs229527
Varsomers229527
Maprs229527
PheGenIrs229527
hapmaprs229527
1000 genomesrs229527
hgdprs229527
ensemblrs229527
gopubmedrs229527
geneviewrs229527
scholarrs229527
googlers229527
pharmgkbrs229527
gwascentralrs229527
openSNPrs229527
23andMers229527
23andMe allrs229527
SNP Nexus

SNPshotrs229527
SNPdbers229527
MSV3drs229527
GWAS Ctlgrs229527
GMAF0.4619
Max Magnitude
? (G;G) (G;T) (T;T) 28
GWAS snp
PMID [PMID 20410501OA-icon.png]
Trait Vitiligo
Title Variant of TYR and Autoimmunity Susceptibility Loci in Generalized Vitiligo
Risk Allele T
P-val 2E-16
Odds Ratio 1.38 [1.28-1.50]

[PMID 19474294OA-icon.png] Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.


GET Evidence
C1QTNF6-G21V
aa_change Gly21Val
aa_change_short G21V
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.397936
summary



GWAS snp
PMID [PMID 23612905]
Trait Graves' disease
Title Robust evidence for five new Graves' disease risk loci from a staged genome-wide association analysis.
Risk Allele
P-val 5E-20
Odds Ratio 1.23 [1.19-1.3]