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rs2298428

From SNPedia

Orientationplus
Stabilizedplus
Make rs2298428(C;C)
Make rs2298428(C;T)
Make rs2298428(T;T)
ReferenceGRCh38 38.1/141
Chromosome22
Position21628603
GeneYDJC
is asnp
is mentioned by
dbSNPrs2298428
ebirs2298428
HLIrs2298428
Exacrs2298428
Varsomers2298428
Maprs2298428
PheGenIrs2298428
hapmaprs2298428
1000 genomesrs2298428
hgdprs2298428
ensemblrs2298428
gopubmedrs2298428
geneviewrs2298428
scholarrs2298428
googlers2298428
pharmgkbrs2298428
gwascentralrs2298428
openSNPrs2298428
23andMers2298428
23andMe allrs2298428
SNP Nexus

SNPshotrs2298428
SNPdbers2298428
MSV3drs2298428
GWAS Ctlgrs2298428
GMAF0.2259
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 20190752OA-icon.png]
Trait Celiac disease
Title Multiple common variants for celiac disease influencing immune gene expression
Risk Allele A
P-val 2E-7
Odds Ratio 1.13 [1.08-1.19]


[PMID 20601676] Analysis of SNPs with an effect on gene expression identifies UBE2L3 and BCL3 as potential new risk genes for Crohn's disease


[PMID 21383967OA-icon.png] Meta-Analysis of Genome-Wide Association Studies in Celiac Disease and Rheumatoid Arthritis Identifies Fourteen Non-HLA Shared Loci


GET Evidence
YDJC-A263T
aa_change Ala263Thr
aa_change_short A263T
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.13866
summary



[PMID 23474282OA-icon.png] Expression Quantitative Trait Loci Analysis Identifies Associations Between Genotype and Gene Expression in Human Intestine


[PMID 22592522] Association of celiac disease genes with inflammatory bowel disease in Finnish and Swedish patients.


[PMID 24871462] Coeliac disease-associated polymorphisms influence thymic gene expression


[PMID 25880549OA-icon.png] Meta-analysis of two Chinese populations identifies an autoimmune disease risk allele in 22q11.21 as associated with systemic lupus erythematosus


[PMID 27094594] The haplotype of UBE2L3 gene is associated with Hashimoto's thyroiditis in a Chinese Han population.