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rs2398162

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 1.3x risk
(A;G) 0 normal
(G;G) 0 normal
ReferenceGRCh38 38.1/141
Chromosome15
Position96287321
GeneLOC100506754
is asnp
is mentioned by
dbSNPrs2398162
ClinGenrs2398162
ebirs2398162
HLIrs2398162
Exacrs2398162
Varsomers2398162
Maprs2398162
PheGenIrs2398162
hapmaprs2398162
1000 genomesrs2398162
hgdprs2398162
ensemblrs2398162
gopubmedrs2398162
geneviewrs2398162
scholarrs2398162
googlers2398162
pharmgkbrs2398162
gwascentralrs2398162
openSNPrs2398162
23andMers2398162
23andMe allrs2398162
SNP Nexus

SNPshotrs2398162
SNPdbers2398162
MSV3drs2398162
GWAS Ctlgrs2398162
GMAF0.3095
Max Magnitude0
? (A;A) (A;G) (G;G) 28
rs2398162 has been reported in a large study to be associated with high blood pressure.

The risk allele (oriented to the dbSNP entry) is (A); the odds ratio associated with heterozygotes is 0.97 (CI 0.76-1.25), and for homozygotes, 1.31 (CI 1.03-1.67). [PMID 17554300OA-icon.png]

GWAS
SNP rs2398162
PubMedID [PMID 17554300OA-icon.png]
Condition Hypertension
Gene NR
Risk Allele A
pValue 6.00E-006
OR 1.31
95% CI 1.03-1.67



[PMID 18523456OA-icon.png] Replication of the Wellcome Trust genome-wide association study of essential hypertension: the Family Blood Pressure Program.


[PMID 20018036OA-icon.png] Using a latent growth curve model for an integrative assessment of the effects of genetic and environmental factors on multiple phenotypes.


[PMID 21228780] Novel genetic variations associated with salt sensitivity in the Korean population.


GET Evidence
rs2398162
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.203125
summary