rs251177
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | somewhat higher risk for prostate cancer | |
| (C;T) | somewhat higher risk for prostate cancer | |
| (T;T) | 0 | normal risk |
| Reference | GRCh38 38.1/141 |
| Chromosome | 5 |
| Position | 141647317 |
| Gene | FCHSD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs251177 |
| dbSNP (classic) | rs251177 |
| ClinGen | rs251177 |
| ebi | rs251177 |
| HLI | rs251177 |
| Exac | rs251177 |
| Gnomad | rs251177 |
| Varsome | rs251177 |
| LitVar | rs251177 |
| Map | rs251177 |
| PheGenI | rs251177 |
| Biobank | rs251177 |
| 1000 genomes | rs251177 |
| hgdp | rs251177 |
| ensembl | rs251177 |
| geneview | rs251177 |
| scholar | rs251177 |
| rs251177 | |
| pharmgkb | rs251177 |
| gwascentral | rs251177 |
| openSNP | rs251177 |
| 23andMe | rs251177 |
| SNPshot | rs251177 |
| SNPdbe | rs251177 |
| MSV3d | rs251177 |
| GWAS Ctlg | rs251177 |
| GMAF | 0.2025 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
rs251177 is one of seven SNPs found in a combined study of over 1,000 patients to be associated with increased risk for prostate cancer. The risk allele for this SNP is (C); and while the odds ratio was not specifically reported, the probability of false significance (not permuted though) was given as p=0.000188, using an additive model of risk.[PMID 18073375]
