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rs2647012

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) slightly increased risk of non-Hodgkin lymphoma in Chinese
(A;G) 1.28x risk of non-Hodgkin lymphoma in Chinese
(G;G) normal
ReferenceGRCh38 38.1/141
Chromosome6
Position32696681
is asnp
is mentioned by
dbSNPrs2647012
ebirs2647012
HLIrs2647012
Exacrs2647012
Varsomers2647012
Maprs2647012
PheGenIrs2647012
hapmaprs2647012
1000 genomesrs2647012
hgdprs2647012
ensemblrs2647012
gopubmedrs2647012
geneviewrs2647012
scholarrs2647012
googlers2647012
pharmgkbrs2647012
gwascentralrs2647012
openSNPrs2647012
23andMers2647012
23andMe allrs2647012
SNP Nexus

SNPshotrs2647012
SNPdbers2647012
MSV3drs2647012
GWAS Ctlgrs2647012
GMAF0.2984
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 21408207OA-icon.png]
Trait
Title Differential Genetic Associations for Systemic Lupus Erythematosus Based on Anti-dsDNA Autoantibody Production
Risk Allele A
P-val 0.000008
Odds Ratio 1.3800 [1.20-1.59]
GWAS snp
PMID [PMID 21533074OA-icon.png]
Trait
Title GWAS of follicular lymphoma reveals allelic heterogeneity at 6p21.32 and suggests shared genetic susceptibility with diffuse large B-cell lymphoma.
Risk Allele G
P-val 2E-21
Odds Ratio 1.5600 [1.43-1.72]

[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.

[PMID 20018075OA-icon.png] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.

[PMID 22296171OA-icon.png] Multi-locus HLA class I and II allele and haplotype associations with follicular lymphoma.


[PMID 22911334OA-icon.png] A two-stage evaluation of genetic variation in immune and inflammation genes with risk of non-Hodgkin lymphoma identifies new susceptibility locus in 6p21.3 region


[PMID 23455380] Risk of genome-wide association study-identified genetic variants for non-Hodgkin lymphoma in a Chinese population.

GWAS snp
PMID [PMID 24925725]
Trait Lupus nephritis in systemic lupus erythematosus
Title Lupus nephritis susceptibility Loci in women with systemic lupus erythematosus.
Risk Allele
P-val 3E-7
Odds Ratio 1.52 [1.3-1.75]


[PMID 24707947] Genetic markers in a multi-ethnic sample for childhood acute lymphoblastic leukemia risk