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rs281864936

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(-;GA) 6 Lynch syndrome, pathogenic mutation
(-;GAGA) 6 Lynch syndrome, pathogenic mutation
(AGAG;AGAG) 0 common in clinvar
(GA;GA) 0 common/normal
(GAGA;GAGA) 0 common in clinvar


Make rs281864936(-;-)
ReferenceGRCh38 38.1/141
Chromosome3
Position37028787
GeneMLH1
is asnp
is mentioned by
dbSNPrs281864936
dbSNP (classic)rs281864936
ClinGenrs281864936
ebirs281864936
HLIrs281864936
Exacrs281864936
Gnomadrs281864936
Varsomers281864936
LitVarrs281864936
Maprs281864936
PheGenIrs281864936
Biobankrs281864936
1000 genomesrs281864936
hgdprs281864936
ensemblrs281864936
geneviewrs281864936
scholarrs281864936
googlers281864936
pharmgkbrs281864936
gwascentralrs281864936
openSNPrs281864936
23andMers281864936
SNPshotrs281864936
SNPdbers281864936
MSV3drs281864936
GWAS Ctlgrs281864936
Max Magnitude6

aka c.1119_1122delGAGA and also c.1119_1120delGA; both are considered pathogenic in ClinVar for Lynch syndrome

ClinVar
Risk rs281864936(-;-)
Alt rs281864936(-;-)
Reference Rs281864936(AGAG;AGAG)
Significance Pathogenic
Disease Lynch syndrome
Variation info
Gene MLH1
CLNDBN Lynch syndrome
Reversed 0
HGVS NC_000003.11:g.37070278_37070281delGAGA
CLNSRC International Society for Gastrointestinal Hereditary Tumours
CLNACC RCV000075204.2,