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rs2858331

From SNPedia

Orientationminus
Stabilizedminus
Make rs2858331(C;C)
Make rs2858331(C;T)
Make rs2858331(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position32713500
is asnp
is mentioned by
dbSNPrs2858331
ebirs2858331
HLIrs2858331
Exacrs2858331
Varsomers2858331
Maprs2858331
PheGenIrs2858331
hapmaprs2858331
1000 genomesrs2858331
hgdprs2858331
ensemblrs2858331
gopubmedrs2858331
geneviewrs2858331
scholarrs2858331
googlers2858331
pharmgkbrs2858331
gwascentralrs2858331
openSNPrs2858331
23andMers2858331
23andMe allrs2858331
SNP Nexus

SNPshotrs2858331
SNPdbers2858331
MSV3drs2858331
GWAS Ctlgrs2858331
GMAF0.4394
Max Magnitude
? (C;C) (C;T) (T;T) 28

Source nature

Celiac diseased rs4988889(T) + rs2858331(C)

Neighborrs7454108
Distance206
GWAS snp
PMID [PMID 22075330OA-icon.png]
Trait
Title A genome-wide association study of plasma total IgE concentrations in the Framingham Heart Study.
Risk Allele G
P-val 1E-8
Odds Ratio 0.0400 None


[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.


[PMID 18509540OA-icon.png] Effective detection of human leukocyte antigen risk alleles in celiac disease using tag single nucleotide polymorphisms.


[PMID 19143815OA-icon.png] MHC fine mapping of human type 1 diabetes using the T1DGC data.


[PMID 20018067OA-icon.png] A two-stage search strategy for detecting multiple loci associated with rheumatoid arthritis.

GWAS snp
PMID [PMID 23146381OA-icon.png]
Trait IgE levels
Title A meta-analysis of genome-wide association studies for serum total IgE in diverse study populations.
Risk Allele G
P-val 6E-6
Odds Ratio NR NR