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rs2860580

From SNPedia

Orientationminus
Stabilizedminus
Make rs2860580(C;C)
Make rs2860580(C;T)
Make rs2860580(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position29938914
GeneHCG4P5
is asnp
is mentioned by
dbSNPrs2860580
ebirs2860580
HLIrs2860580
Exacrs2860580
Varsomers2860580
Maprs2860580
PheGenIrs2860580
hapmaprs2860580
1000 genomesrs2860580
hgdprs2860580
ensemblrs2860580
gopubmedrs2860580
geneviewrs2860580
scholarrs2860580
googlers2860580
pharmgkbrs2860580
gwascentralrs2860580
openSNPrs2860580
23andMers2860580
23andMe allrs2860580
SNP Nexus

SNPshotrs2860580
SNPdbers2860580
MSV3drs2860580
GWAS Ctlgrs2860580
GMAF0.3802
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 20512145]
Trait Nasopharyngeal carcinoma
Title A genome-wide association study of nasopharyngeal carcinoma identifies three new susceptibility loci.
Risk Allele
P-val 5E-67
Odds Ratio 1.72 [1.61-1.82]
OMIM607107
Desc
Variant
Relatedalso
[PMID 18519066OA-icon.png] Detection, imputation, and association analysis of small deletions and null alleles on oligonucleotide arrays.


[PMID 27517745] Nasopharyngeal carcinoma risk prediction via salivary detection of host and Epstein-Barr virus genetic variants.