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rs28694718

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) 1.5 >2x higher risk for schizophrenia
(A;G) 1.5 2x higher risk for schizophrenia
(G;G) common
ReferenceGRCh38 38.1/141
ChromosomeX
Position1295332
GeneCSF2RA
is asnp
is mentioned by
dbSNPrs28694718
ebirs28694718
HLIrs28694718
Exacrs28694718
Varsomers28694718
Maprs28694718
PheGenIrs28694718
hapmaprs28694718
1000 genomesrs28694718
hgdprs28694718
ensemblrs28694718
gopubmedrs28694718
geneviewrs28694718
scholarrs28694718
googlers28694718
pharmgkbrs28694718
gwascentralrs28694718
openSNPrs28694718
23andMers28694718
23andMe allrs28694718
SNP Nexus

SNPshotrs28694718
SNPdbers28694718
MSV3drs28694718
GWAS Ctlgrs28694718
GMAF0.2773
Max Magnitude1.5

In the Pseudoautosomal region

rs28694718, located in intron 8 of the CSF2RA gene, is part of a haplotype block that has been reported in a whole genome association study to be associated with schizophrenia. (The other SNP in this block is rs28414810.)

The risk allele (oriented to the dbSNP entry) is (A); the odds ratio associated with this allele is 2.11. [PMID 17522711]