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rs29232

From SNPedia

Orientationminus
Stabilizedminus
Make rs29232(A;A)
Make rs29232(A;G)
Make rs29232(G;G)
ReferenceGRCh38 38.1/141
Chromosome6
Position29643654
is asnp
is mentioned by
dbSNPrs29232
ebirs29232
HLIrs29232
Exacrs29232
Varsomers29232
Maprs29232
PheGenIrs29232
hapmaprs29232
1000 genomesrs29232
hgdprs29232
ensemblrs29232
gopubmedrs29232
geneviewrs29232
scholarrs29232
googlers29232
pharmgkbrs29232
gwascentralrs29232
openSNPrs29232
23andMers29232
23andMe allrs29232
SNP Nexus

SNPshotrs29232
SNPdbers29232
MSV3drs29232
GWAS Ctlgrs29232
GMAF0.4325
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 19664746OA-icon.png]
Trait Nasopharyngeal Carcinoma
Title Genome-wide Association Study Reveals Multiple Nasopharyngeal Carcinoma-Associated Loci within the HLA Region at Chromosome 6p21.
Risk Allele A
P-val 9E-17
Odds Ratio 1.67 [1.48-1.88]
OMIM161550
Desc
Variant
Relatedalso
[PMID 21283797OA-icon.png] Identification of genes with allelic imbalance on 6p associated with nasopharyngeal carcinoma in southern Chinese.


GET Evidence
rs29232
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.460938
summary



Nasopharyngeal Cancer


[PMID 26307051OA-icon.png] Heterogeneity revealed through meta-analysis might link geographical differences with nasopharyngeal carcinoma incidence in Han Chinese populations