rs29232

Orientation

minus

Stabilized

minus

Make rs29232(A;A)

Make rs29232(A;G)

Make rs29232(G;G)

Reference

GRCh38 38.1/141

Chromosome

6

Position

29643654

is a	snp
is	mentioned by
dbSNP	rs29232
dbSNP (classic)	rs29232
ClinGen	rs29232
ebi	rs29232
HLI	rs29232
Exac	rs29232
Gnomad	rs29232
Varsome	rs29232
LitVar	rs29232
Map	rs29232
PheGenI	rs29232
Biobank	rs29232
1000 genomes	rs29232
hgdp	rs29232
ensembl	rs29232
geneview	rs29232
scholar	rs29232
google	rs29232
pharmgkb	rs29232
gwascentral	rs29232
openSNP	rs29232
23andMe	rs29232
SNPshot	rs29232
SNPdbe	rs29232
MSV3d	rs29232
GWAS Ctlg	rs29232

GMAF

0.4325

Max Magnitude

0

?	(A;A) (A;G) (G;G)	28

GWAS snp
PMID	[PMID 19664746]
Trait	Nasopharyngeal Carcinoma
Title	Genome-wide Association Study Reveals Multiple Nasopharyngeal Carcinoma-Associated Loci within the HLA Region at Chromosome 6p21.
Risk Allele	A
P-val	9E-17
Odds Ratio	1.67 [1.48-1.88]

OMIM	161550
Desc
Variant
Related	also

[PMID 21283797] Identification of genes with allelic imbalance on 6p associated with nasopharyngeal carcinoma in southern Chinese.

Nasopharyngeal Cancer

[PMID 26307051] Heterogeneity revealed through meta-analysis might link geographical differences with nasopharyngeal carcinoma incidence in Han Chinese populations

[PMID 28467961] Detection of nasopharyngeal carcinoma susceptibility with single nucleotide polymorphism analysis using next-generation sequencing technology.

[PMID 28881764] Detection of nasopharyngeal carcinoma susceptibility with single nucleotide polymorphism analysis using next-generation sequencing technology.

[PMID 30126334] Systematic Review and Meta-analysis of SNPs from Genome-Wide Association Studies of Head and Neck Cancer.