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rs3093023

From SNPedia

Orientationplus
Stabilizedplus
Make rs3093023(A;A)
Make rs3093023(A;G)
Make rs3093023(G;G)
ReferenceGRCh38 38.1/141
Chromosome6
Position167120802
GeneCCR6
is asnp
is mentioned by
dbSNPrs3093023
ebirs3093023
HLIrs3093023
Exacrs3093023
Varsomers3093023
Maprs3093023
PheGenIrs3093023
hapmaprs3093023
1000 genomesrs3093023
hgdprs3093023
ensemblrs3093023
gopubmedrs3093023
geneviewrs3093023
scholarrs3093023
googlers3093023
pharmgkbrs3093023
gwascentralrs3093023
openSNPrs3093023
23andMers3093023
23andMe allrs3093023
SNP Nexus

SNPshotrs3093023
SNPdbers3093023
MSV3drs3093023
GWAS Ctlgrs3093023
GMAF0.3398
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 20453842OA-icon.png]
Trait Rheumatoid arthritis
Title Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
Risk Allele A
P-val 2E-11
Odds Ratio 1.13 [NR]


[PMID 21120996OA-icon.png] Most common single-nucleotide polymorphisms associated with rheumatoid arthritis in persons of European ancestry confer risk of rheumatoid arthritis in African Americans

OMIM180300
Desc
Variant
Relatedalso


[PMID 20973039] Most common SNPs associated with rheumatoid arthritis in subjects of European ancestry confer risk of rheumatoid arthritis in African-Americans.


[PMID 21763254] Polymorphisms in CCR6 are associated with chronic graft-versus-host disease and invasive fungal disease in matched-related hematopoietic stem cell transplantation.


[PMID 21873313] There is no association of CCR6 polymorphisms with susceptibility to Behcet's disease in two Chinese Han populations.


[PMID 23983073] A regulatory variant in CCR6 is associated with anti-topoisomerase positive systemic sclerosis susceptibility


[PMID 22328738OA-icon.png] Comprehensive assessment of rheumatoid arthritis susceptibility loci in a large psoriatic arthritis cohort.


[PMID 22922229OA-icon.png] Seven newly identified loci for autoimmune thyroid disease.


[PMID 23678157] Integrative analyses for functional mechanisms underlying associations for rheumatoid arthritis.

GWAS snp
PMID [PMID 24782177]
Trait Rheumatoid arthritis
Title Novel risk loci for rheumatoid arthritis in Han Chinese and congruence with risk variants in Europeans.
Risk Allele A
P-val 4E-9
Odds Ratio 1.15 [NR]


[PMID 25928629OA-icon.png] RNASET2 tag SNP but not CCR6 polymorphisms is associated with autoimmune thyroid diseases in the Chinese Han population