rs3117099
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs3117099(C;C) |
| Make rs3117099(C;T) |
| Make rs3117099(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 32390493 |
| Gene | HCG23, LOC101929163 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3117099 |
| dbSNP (classic) | rs3117099 |
| ClinGen | rs3117099 |
| ebi | rs3117099 |
| HLI | rs3117099 |
| Exac | rs3117099 |
| Gnomad | rs3117099 |
| Varsome | rs3117099 |
| LitVar | rs3117099 |
| Map | rs3117099 |
| PheGenI | rs3117099 |
| Biobank | rs3117099 |
| 1000 genomes | rs3117099 |
| hgdp | rs3117099 |
| ensembl | rs3117099 |
| geneview | rs3117099 |
| scholar | rs3117099 |
| rs3117099 | |
| pharmgkb | rs3117099 |
| gwascentral | rs3117099 |
| openSNP | rs3117099 |
| 23andMe | rs3117099 |
| SNPshot | rs3117099 |
| SNPdbe | rs3117099 |
| MSV3d | rs3117099 |
| GWAS Ctlg | rs3117099 |
| GMAF | 0.314 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22688191 ]
|
| Trait | |
| Title | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. |
| Risk Allele | |
| P-val | 0.000003 |
| Odds Ratio | 1.2500 None |
[PMID 17927685] BTNL2 allele associations with chronic beryllium disease in HLA-DPB1*Glu69-negative individuals.
[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
[PMID 20018075] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
