Have questions? Visit https://www.reddit.com/r/SNPedia

rs3117583

From SNPedia

Orientationminus
Stabilizedminus
Make rs3117583(C;C)
Make rs3117583(C;T)
Make rs3117583(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position31651799
GeneAPOM, BAG6
is asnp
is mentioned by
dbSNPrs3117583
ebirs3117583
HLIrs3117583
Exacrs3117583
Varsomers3117583
Maprs3117583
PheGenIrs3117583
hapmaprs3117583
1000 genomesrs3117583
hgdprs3117583
ensemblrs3117583
gopubmedrs3117583
geneviewrs3117583
scholarrs3117583
googlers3117583
pharmgkbrs3117583
gwascentralrs3117583
openSNPrs3117583
23andMers3117583
23andMe allrs3117583
SNP Nexus

SNPshotrs3117583
SNPdbers3117583
MSV3drs3117583
GWAS Ctlgrs3117583
GMAF0.1309
Max Magnitude
? (C;C) (C;T) (T;T) 28
[PMID 15743917‎] HLA-B*5801 allele as a genetic marker for severe cutaneous adverse reactions caused by allopurinol.

"In particular, three SNPs in the MHC class III region have P values <10-7 (-log10 P value > 7, Fig. 1). These SNPs were rs3117583 of BAT3 (encoding for HLA-B associated transcript 3), rs1150793 of MSH5 (encoding mutS homolog), and rs2855804 of MICB (encoding MHC class I polypeptide-related sequence)."


[PMID 18204098] Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.


[PMID 19143813OA-icon.png] Confirmation of HLA class II independent type 1 diabetes associations in the major histocompatibility complex including HLA-B and HLA-A.


[PMID 26083016] Accuracy of SNPs to predict risk of HLA alleles associated with drug-induced hypersensitivity events across racial groups