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rs3129882

From SNPedia

Orientationplus
Stabilizedplus
Make rs3129882(A;A)
Make rs3129882(A;G)
Make rs3129882(G;G)
ReferenceGRCh38 38.1/141
Chromosome6
Position32441753
GeneHLA-DRA
is asnp
is mentioned by
dbSNPrs3129882
ebirs3129882
HLIrs3129882
Exacrs3129882
Varsomers3129882
Maprs3129882
PheGenIrs3129882
hapmaprs3129882
1000 genomesrs3129882
hgdprs3129882
ensemblrs3129882
gopubmedrs3129882
geneviewrs3129882
scholarrs3129882
googlers3129882
pharmgkbrs3129882
gwascentralrs3129882
openSNPrs3129882
23andMers3129882
23andMe allrs3129882
SNP Nexus

SNPshotrs3129882
SNPdbers3129882
MSV3drs3129882
GWAS Ctlgrs3129882
GMAF0.4697
Max Magnitude
? (A;A) (A;G) (G;G) 28
[PMID 20711177OA-icon.png] Common genetic variation in the HLA region is associated with late-onset sporadic Parkinson's disease
OMIM168600
Desc
Variant
Relatedalso


[PMID 21791235] HLA rs3129882 variant in Chinese Han patients with late-onset sporadic Parkinson disease

GWAS snp
PMID [PMID 21779181OA-icon.png]
Trait
Title Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy.
Risk Allele
P-val 2E-27
Odds Ratio 2.1700 [1.88-2.50]


[PMID 22451204OA-icon.png] Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2


[PMID 22243834] Genetic analysis of HLA-DRA region variation in Taiwanese Parkinson's disease.


[PMID 19936222OA-icon.png] Forty-three loci associated with plasma lipoprotein size, concentration, and cholesterol content in genome-wide analysis.


[PMID 20018063OA-icon.png] Detecting significant single-nucleotide polymorphisms in a rheumatoid arthritis study using random forests.


[PMID 20018067OA-icon.png] A two-stage search strategy for detecting multiple loci associated with rheumatoid arthritis.


[PMID 20018081OA-icon.png] Assessment of gene-covariate interactions by incorporating covariates into association mapping.


[PMID 21482477OA-icon.png] Human leukocyte antigen variation and Parkinson's disease.


[PMID 24183452OA-icon.png] Association of Parkinson Disease with Structural and Regulatory Variants in the HLA Region


[PMID 23083294] Association of HLA locus variant in Parkinson's disease.


[PMID 23543094OA-icon.png] Testing for associations between loci and environmental gradients using latent factor mixed models.


[PMID 23579001] The HLA-DRA variation rs3129882 is not associated with Parkinson's disease in Sweden.

GWAS snp
PMID [PMID 24511991OA-icon.png]
Trait Parkinson's disease
Title Identification of a novel Parkinson's disease locus via stratified genome-wide association study.
Risk Allele G
P-val 3E-8
Odds Ratio 1.31 [1.19-1.43]


[PMID 25720714] Association between HLA rs3129882 polymorphism and Parkinson's disease: a meta-analysis