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rs3135363

From SNPedia

Orientationminus
Stabilizedminus
Make rs3135363(C;C)
Make rs3135363(C;T)
Make rs3135363(T;T)
ReferenceGRCh38 38.1/141
Chromosome6
Position32421871
is asnp
is mentioned by
dbSNPrs3135363
ebirs3135363
HLIrs3135363
Exacrs3135363
Varsomers3135363
Maprs3135363
PheGenIrs3135363
hapmaprs3135363
1000 genomesrs3135363
hgdprs3135363
ensemblrs3135363
gopubmedrs3135363
geneviewrs3135363
scholarrs3135363
googlers3135363
pharmgkbrs3135363
gwascentralrs3135363
openSNPrs3135363
23andMers3135363
23andMe allrs3135363
SNP Nexus

SNPshotrs3135363
SNPdbers3135363
MSV3drs3135363
GWAS Ctlgrs3135363
GMAF0.2479
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 21764829]
Trait
Title A genome-wide association study of hepatitis B vaccine response in an Indonesian population reveals multiple independent risk variants in the HLA region.
Risk Allele
P-val 7E-22
Odds Ratio 1.5300 [1.35-1.74]

[PMID 19143810OA-icon.png] Haplotype-based search for SNPs associated with differential type 1 diabetes risk among chromosomes carrying a specific HLA DRB1-DQA1-DQB1 haplotype.

[PMID 19458352OA-icon.png] Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

[PMID 20018006OA-icon.png] Case-control genome-wide association study of rheumatoid arthritis from Genetic Analysis Workshop 16 using penalized orthogonal-components regression-linear discriminant analysis.

[PMID 20041220OA-icon.png] Autoimmune disease classification by inverse association with SNP alleles.

GWAS snp
PMID [PMID 23321320]
Trait Hepatitis C induced liver cirrhosis
Title A genome-wide association study of HCV-induced liver cirrhosis in the Japanese population identifies novel susceptibility loci at the MHC region.
Risk Allele C
P-val 1E-10
Odds Ratio 1.37 [1.24-1.51]
GWAS snp
PMID [PMID 24282030]
Trait Hepatitis B vaccine response
Title A genome-wide association study identifies polymorphisms in the HLA-DR region associated with non-response to hepatitis B vaccination in Chinese Han populations.
Risk Allele
P-val 8E-7
Odds Ratio 1.51 [1.28-1.78]