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rs3737787

From SNPedia

Orientationminus
Stabilizedminus
Make rs3737787(C;C)
Make rs3737787(C;T)
Make rs3737787(T;T)
ReferenceGRCh38 38.1/141
Chromosome1
Position161039733
GeneTSTD1, USF1
is asnp
is mentioned by
dbSNPrs3737787
ebirs3737787
HLIrs3737787
Exacrs3737787
Varsomers3737787
Maprs3737787
PheGenIrs3737787
hapmaprs3737787
1000 genomesrs3737787
hgdprs3737787
ensemblrs3737787
gopubmedrs3737787
geneviewrs3737787
scholarrs3737787
googlers3737787
pharmgkbrs3737787
gwascentralrs3737787
openSNPrs3737787
23andMers3737787
23andMe allrs3737787
SNP Nexus

SNPshotrs3737787
SNPdbers3737787
MSV3drs3737787
GWAS Ctlgrs3737787
GMAF0.2158
Max Magnitude
? (C;C) (C;T) (T;T) 28
OMIM191523
DescHYPERLIPIDEMIA, FAMILIAL COMBINED, SUSCEPTIBILITY TO
Variant0001
Relatedalso

[PMID 17673701] contributes to high serum lipid levels in Dutch familial combined hyperlipidemia families and U.S. whites with coronary artery disease


[PMID 19750004OA-icon.png] A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia

[PMID 15657872OA-icon.png] Association testing in a linked region using large pedigrees.

[PMID 15959806] Upstream stimulatory factor 1 associated with familial combined hyperlipidemia, LDL cholesterol, and triglycerides.

[PMID 15976322] Familial combined hyperlipidemia in Mexicans: association with upstream transcription factor 1 and linkage on chromosome 16q24.1.

[PMID 16132950] The linkage and association of the gene encoding upstream stimulatory factor 1 with type 2 diabetes and metabolic syndrome in the Chinese population.

[PMID 16186412] Common polymorphisms in the USF1 gene are not associated with type 2 diabetes in French Caucasians.

[PMID 16936202] Variation within the gene encoding the upstream stimulatory factor 1 does not influence susceptibility to type 2 diabetes in samples from populations with replicated evidence of linkage to chromosome 1q.

[PMID 18067551] Association of F11 receptor gene polymorphisms with central obesity and blood pressure.

[PMID 18276913OA-icon.png] Association analysis of allelic variants of USF1 in coronary atherosclerosis.

[PMID 18303204OA-icon.png] Body mass index is associated with USF1 haplotype in Korean premenopausal women.

[PMID 18445538] Upstream transcription factor 1 (USF1) in risk of type 2 diabetes: association study in 2000 Dutch Caucasians.

[PMID 18577828] Allelic variants of upstream transcription factor 1 associate with carotid artery intima-media thickness: the Cardiovascular Risk in Young Finns study.

[PMID 18593823] Genetic variants in the USF1 gene are associated with low-density lipoprotein cholesterol levels and incident type 2 diabetes mellitus in women: results from the MONICA/KORA Augsburg case-cohort study, 1984-2002.


ClinVar
Risk rs3737787(T;T)
Alt rs3737787(T;T)
Reference rs3737787(C;C)
Significance Other
Disease Hyperlipidemia
Variation info
Gene TSTD1 USF1
CLNDBN Hyperlipidemia, familial combined, susceptibility to
Reversed 1
HGVS NC_000001.10:g.161009523G>A
CLNSRC OMIM Allelic Variant
CLNACC RCV000013088.2,



[PMID 26052935] Association between single nucleotide polymorphisms of upstream transcription factor 1 (USF1) and susceptibility to papillary thyroid cancer


[PMID 26068452] The rs2516839 Polymorphism of the USF1 Gene May Modulate Serum Triglyceride Levels in Response to Cigarette Smoking