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rs3758249

From SNPedia

Orientationminus
Stabilizedminus
Make rs3758249(A;A)
Make rs3758249(A;G)
Make rs3758249(G;G)
ReferenceGRCh38 38.1/141
Chromosome9
Position97851858
GeneFOXE1, RP11-23B15.1
is asnp
is mentioned by
dbSNPrs3758249
ebirs3758249
HLIrs3758249
Exacrs3758249
Varsomers3758249
Maprs3758249
PheGenIrs3758249
hapmaprs3758249
1000 genomesrs3758249
hgdprs3758249
ensemblrs3758249
gopubmedrs3758249
geneviewrs3758249
scholarrs3758249
googlers3758249
pharmgkbrs3758249
gwascentralrs3758249
openSNPrs3758249
23andMers3758249
23andMe allrs3758249
SNP Nexus

SNPshotrs3758249
SNPdbers3758249
MSV3drs3758249
GWAS Ctlgrs3758249
GMAF0.2984
Max Magnitude
? (A;A) (A;G) (G;G) 28
OMIM602617
DescFORKHEAD BOX E1; FOXE1
Variant
Relatedalso
OMIM119530
Desc
Variant
Relatedalso
[PMID 19521098OA-icon.png] Genome scan, fine-mapping, and candidate gene analysis of non-syndromic cleft lip with or without cleft palate reveals phenotype-specific differences in linkage and association results.


[PMID 19730683OA-icon.png] The variant rs1867277 in FOXE1 gene confers thyroid cancer susceptibility through the recruitment of USF1/USF2 transcription factors.


[PMID 19779022OA-icon.png] FOXE1 association with both isolated cleft lip with or without cleft palate, and isolated cleft palate.


[PMID 20583170OA-icon.png] Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate. [PMID 23463464OA-icon.png] Replication of genome wide association identified candidate genes confirm the role of common and rare variants in PAX7 and VAX1 in the etiology of nonsyndromic CL(P).

[PMID 26198054] Genetic risk factors for nonsyndromic cleft lip with or without cleft palate in a Brazilian population with high African ancestry