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rs3803800

From SNPedia

Orientationplus
Stabilizedplus
Make rs3803800(A;A)
Make rs3803800(A;G)
Make rs3803800(G;G)
ReferenceGRCh38 38.1/141
Chromosome17
Position7559652
GeneTNFSF12-TNFSF13, TNFSF13
is asnp
is mentioned by
dbSNPrs3803800
ebirs3803800
HLIrs3803800
Exacrs3803800
Varsomers3803800
Maprs3803800
PheGenIrs3803800
hapmaprs3803800
1000 genomesrs3803800
hgdprs3803800
ensemblrs3803800
gopubmedrs3803800
geneviewrs3803800
scholarrs3803800
googlers3803800
pharmgkbrs3803800
gwascentralrs3803800
openSNPrs3803800
23andMers3803800
23andMe allrs3803800
SNP Nexus

SNPshotrs3803800
SNPdbers3803800
MSV3drs3803800
GWAS Ctlgrs3803800
GMAF0.3728
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 22197929]
Trait
Title A genome-wide association study in Han Chinese identifies multiple susceptibility loci for IgA nephropathy.
Risk Allele A
P-val 9E-11
Odds Ratio 1.2100 None

[PMID 22558069OA-icon.png] Association of Common Variants in TNFRSF13B, TNFSF13, and ANXA3 with Serum Levels of Non-Albumin Protein and Immunoglobulin Isotypes in Japanese


[PMID 17569747] APRIL polymorphism and systemic lupus erythematosus (SLE) susceptibility.


[PMID 18254984OA-icon.png] Screening of functional and positional candidate genes in families with common variable immunodeficiency.


GET Evidence
TNFSF13-N96S
aa_change Asn96Ser
aa_change_short N96S
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency
summary



[PMID 22864923] Genome-wide association study identifies TNFSF13 as a susceptibility gene for IgA in a South Chinese population in smokers


[PMID 26370181] Association between CCDC132, FDX1 and TNFSF13 gene polymorphisms and the risk of IgA nephropathy


[PMID 26431901] Genetic polymorphisms in TNFSF13 and FDX1 are associated with IgA nephropathy in the Han Chinese population


[PMID 24811838OA-icon.png] Cumulative effects of variants identified by genome-wide association studies in IgA nephropathy