rs397508979
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common in clinvar |
(-;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs397508979(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43092974 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs397508979 |
dbSNP (classic) | rs397508979 |
ClinGen | rs397508979 |
ebi | rs397508979 |
HLI | rs397508979 |
Exac | rs397508979 |
Gnomad | rs397508979 |
Varsome | rs397508979 |
LitVar | rs397508979 |
Map | rs397508979 |
PheGenI | rs397508979 |
Biobank | rs397508979 |
1000 genomes | rs397508979 |
hgdp | rs397508979 |
ensembl | rs397508979 |
geneview | rs397508979 |
scholar | rs397508979 |
rs397508979 | |
pharmgkb | rs397508979 |
gwascentral | rs397508979 |
openSNP | rs397508979 |
23andMe | rs397508979 |
SNPshot | rs397508979 |
SNPdbe | rs397508979 |
MSV3d | rs397508979 |
GWAS Ctlg | rs397508979 |
Max Magnitude | 6 |
aka c.2556_2557insTTCACTTTTC
ClinVar | |
---|---|
Risk | rs397508979(TTCACTTTTC;TTCACTTTTC) rs397508979(T;T) |
Alt | rs397508979(TTCACTTTTC;TTCACTTTTC) rs397508979(T;T) |
Reference | Rs397508979(-;-) |
Significance | Pathogenic |
Disease | Neoplasm of breast Familial cancer of breast |
Variation | info |
Gene | BRCA1 |
CLNDBN | Neoplasm of breast Familial cancer of breast |
Reversed | 1 |
HGVS | NC_000017.10:g.41244991_41244992insGAAAAGTGAA; NC_000017.10:g.41244992dupA |
CLNSRC | ClinVar |
CLNACC | RCV000240805.1, RCV000047875.2, |